Alteromonas sp. Mac1: AV939_01565
Help
Entry
AV939_01565 CDS
T05687
Name
(GenBank) ligand-gated channel
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ale02000
]
AV939_01565
Transporters [BR:
ale02000
]
Other transporters
Pores ion channels [TC:
1
]
AV939_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OmpW
Motif
Other DBs
NCBI-ProteinID:
AMJ85382
LinkDB
All DBs
Position
389329..391368
Genome browser
AA seq
679 aa
AA seq
DB search
MKKLVFISAVCTLSSALSYAQAQETDETTSVEKISVVGATTNLSITAEDIEQYQANDLAD
IFRNSPSISVGGSVGVAQKIYIRGLEDAYLNVTVDGAQQTSTLFHHIGRVTIDPDLLQQI
DVQAGAGEATSGPGAIGGSIRFKTKDADDLLAKGEQFGGRVKASYFSNDGTRYSGSLYGK
LSDTWGVLGYYSTVDRDNMEDGDGNEIYGTAADQDMLFFKASGDIAENHYLSLSVEQRDE
EGEFSARPNWVVLEGAALYPSEAQRDTYVANYRFAHSDMVYLEATAYQTDSSFQGGRFNW
LAEIDTYGFDIRNTSETAKHKFVYGVDYRSDEVTSGSAGGTTDNAEESSVMGIYAQGYSD
ITPELLLSYGVRYDDYDFQQRILLEEYYGTPVTDSEASLDDSELSFNIGVAYQLTEAWTL
GLGYAEAARGKEIGDGFTIDGYLYDGSDIPVVADDLVPETVQNIEASIEYSANNLNARLS
VYNSTLDDVIFEGYEGNSVFNNIGTVESSGIEFDLAYRVDSFDFFFGFSTADSELDPRDG
IYNVDYSSIDLNGYEFVGLGNSRGDTIVVGVDYTVNADISVGTSIRQVRSIDIDTLHQAV
DLGWTDSLYSLNKPSYTLVDLYGEWQATSNILVNLAVSNLFDEYYIDHSSVGDYSEVFAT
VIGPHEAGRDIRLSVSYNF
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaactagtgttcattagtgcagtttgcacactatctagcgcgctttcctatgcc
caagcgcaagagactgacgaaacaacttctgtcgaaaaaatctctgtagtaggtgctaca
acaaacctaagtattactgctgaagacatcgagcaataccaagctaatgatctcgctgat
atatttcgtaactcgccttcaattagtgtcggcggttcggtaggcgtggcgcaaaaaata
tatatccgtggcctagaagacgcttatttaaatgtcaccgttgatggtgcgcagcaaacg
tcaaccctgtttcaccatattggccgagtaactatcgatccagatttactgcagcaaatt
gatgtacaagcaggcgctggtgaagcaactagtggccctggcgcaattggtggttcaatt
cgatttaaaaccaaagatgctgacgaccttttagctaaaggtgagcaatttggtggccga
gttaaagcaagctacttttcgaacgacggcacccgctatagcggtagcctttacggtaag
ctaagtgatacatggggcgtgctaggttattacagcacagtcgatcgcgataacatggaa
gatggcgacggtaacgaaatttacggtacagcagccgatcaagacatgttgttctttaaa
gccagtggtgatattgctgaaaaccattacttgtcgttaagtgttgagcagcgtgatgaa
gaaggtgagttttctgcccgccctaactgggtagtcttggaaggcgcagcactttaccca
agtgaagcacagcgtgatacttatgtagctaactaccgtttcgcgcacagcgatatggtg
tacttagaagccacggcctatcaaaccgattcttcattccaaggcggtcgttttaactgg
ttagctgaaatcgacacttacggtttcgatattcgcaataccagtgaaactgccaagcat
aagtttgtgtacggggtagattatcgcagtgatgaagttacaagtggttctgctggcggt
acaacagataacgcagaagaaagcagcgtaatgggcatctacgctcaaggttacagcgac
attacgcctgaactattacttagctacggtgtgcgctacgacgattatgacttccagcaa
cgcattttactcgaagagtattacggtacaccagttactgacagcgaagcttcactagac
gactctgaactaagcttcaatattggtgttgcttatcagctgacagaagcttggacctta
gggttaggttatgccgaagccgccagaggaaaagagattggcgatggtttcactatcgac
ggttacctttacgatggctcagatattccagtggttgctgatgatttagtgccagaaacg
gttcaaaacattgaagcctcaattgagtacagcgctaataacctaaatgcgagattaagc
gtttataactcaaccctagatgatgtgatttttgaaggttacgaaggcaattctgttttc
aataacattggtacggtagaaagcagcggtattgaattcgaccttgcctatcgcgtagat
tcattcgactttttctttggtttctcaactgctgatagtgaacttgacccaagagatggc
atttacaacgtagactactcgtcaattgatttgaacggttatgaatttgtgggcttaggt
aatagccgcggcgatactatagtggttggcgtagattacacggttaacgccgatattagc
gtaggtacaagtattagacaggttaggtctattgatattgataccttgcatcaggcggtt
gatttgggttggacagacagtttgtatagcttgaacaaaccaagctacacccttgttgac
ttgtatggtgagtggcaggccacaagcaatattctggttaacctagcagtgtctaacttg
tttgatgagtactacatcgaccattcaagtgtaggtgactacagtgaagtgtttgctact
gttatcggcccccatgaagcaggtagggatattagactatcagtatcttataacttctag
DBGET
integrated database retrieval system
