Alteromonas sp. Mac1: AV939_05105
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Entry
AV939_05105 CDS
T05687
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV939_05105 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ale03032
]
AV939_05105 (rnhB)
Enzymes [BR:
ale01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AV939_05105 (rnhB)
DNA replication proteins [BR:
ale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
AV939_05105 (rnhB)
Elongation factors (archaeal)
AV939_05105 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AMJ86015
LinkDB
All DBs
Position
1216418..1216993
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AA seq
191 aa
AA seq
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MHKLIAGVDEVGRGPLVGDVVTAAVILDPANPIVGLTDSKKLSEKKRIALAAEIKAKALY
WHIGRATPEEIDILNILHATMLAMKRAVEGLAVTPDFVRVDGNRLPDWPYAAEAVVKGDS
LYAEISAASIIAKVERDNDMLALDELHPEYGFAGHKGYPTKAHFEALATHGVIDGYRKSF
KPVKALLQEIQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttgcataagttaatagccggcgtagatgaagttggaagaggcccacttgttggggatgtg
gtaaccgccgccgttatactcgaccctgccaaccccatagtagggttaaccgactctaaa
aagctcagcgaaaaaaaacgtattgcgttagccgctgaaataaaagcgaaagcgctttat
tggcatatagggcgcgccacaccagaagaaatcgacatccttaatattctccatgctacc
atgttagccatgaagcgtgctgtggaaggtttagcggtaacgccagactttgttcgggtt
gatggtaatcgattacctgattggccttatgctgcagaagctgtggttaagggcgatagc
ctatacgctgaaatttctgccgcttccatcattgccaaagtagaacgtgacaacgatatg
ctggcattggatgaattacatccagaatatggttttgctggccataaaggttatcctaca
aaagcgcattttgaagcactcgccacccatggcgtgattgatggttatcgcaaaagcttt
aaaccagttaaggcactactacaagagattcaataa
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