Agrobacterium leguminum: CFBP4996_24410
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Entry
CFBP4996_24410 CDS
T09300
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
aleg
Agrobacterium leguminum
Pathway
aleg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFBP4996_24410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aleg03400
]
CFBP4996_24410
DNA repair and recombination proteins [BR:
aleg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFBP4996_24410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WFS69124
LinkDB
All DBs
Position
Linear:complement(2163963..2164754)
Genome browser
AA seq
263 aa
AA seq
DB search
MARQVFWKGYLKLSLVTASVSLTPATTEGNKYTFHILNRKTGNRVESRYVDSITHRPVAA
KNQVKGFPRAEDDYVLLEDDEIDAVALESTRTIDIKTFVPKGSIDWIWYDRPHFLRPEDK
IGTEAFSVIREAMKVNDVFGIARLVIYRRERAVLLEPSGKGIILWTLHYGEEVRESIDAL
EPKMKMDRPLLDAMEKRIGKQVTGWKPALVQDPIQKKIKSLLKTKGDEVSSSKKKTGTKA
RTGGNVINIMDALKKSLASEKRS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggcacggcaggttttctggaagggttatctgaagctgtcgctggtgacggcttccgtc
tcgctgacgcccgcgacgacggaaggcaacaaatacaccttccacatcctcaatcgcaaa
accggcaaccgcgtcgaaagccgctatgtcgacagcatcacccaccgaccggtcgccgcc
aaaaaccaggtaaaaggttttccccgcgccgaggatgactatgtcctgctggaagatgac
gagatcgatgcggtggcgctggaaagcacccgcaccatcgatatcaagaccttcgtgccg
aaaggatcgatcgactggatctggtacgaccgtccgcattttctgcgcccggaagacaag
atcggcaccgaagccttcagcgtcattcgcgaagccatgaaggtgaacgatgttttcggc
atcgcgcgcctcgtaatctaccgtcgtgaaagggctgtgctcctcgaaccatcggggaaa
ggcatcatcctgtggacgctgcattatggcgaagaggtacgcgaaagcatcgacgcgctg
gagccgaagatgaaaatggaccggccattgctggacgccatggaaaaacgcatcggcaaa
caggtgacgggttggaaaccggctttggtacaggaccccattcagaagaagatcaagtcc
ctgctgaagaccaagggcgacgaggtctcctcctcgaaaaagaaaaccggcacgaaggca
cgcaccggcggcaatgtcatcaacatcatggacgccctgaagaaaagccttgcttccgaa
aagagaagctga
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