Azospirillum lipoferum: AZOLI_p40055
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Entry
AZOLI_p40055 CDS
T01658
Symbol
rpoH1
Name
(GenBank) RNA polymerase sigma factor (sigma32)
KO
K03089
RNA polymerase sigma-32 factor
Organism
ali
Azospirillum lipoferum
Brite
KEGG Orthology (KO) [BR:
ali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ali03021
]
AZOLI_p40055 (rpoH1)
Transcription machinery [BR:
ali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AZOLI_p40055 (rpoH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_3
HTH_25
HTH_35
HTH_11
Motif
Other DBs
NCBI-ProteinID:
CBS90460
UniProt:
G7ZFR6
LinkDB
All DBs
Position
AZO_p4:50326..51216
Genome browser
AA seq
296 aa
AA seq
DB search
MATASNLPAIGSESNLSRYLQEIRKFPMLEPEREYMLAKRWQQHEDSGAAHQLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRRLKGQMQAIEEGDLSPEQVQAIATKLDVPEQDVVNMNRRL
ASPDHSLNAPLRAESEGEWQDFLVDETASQEITLADREELGKRRKLLANAMTALNERERD
ILTERRLREAPTTLEDLSQKYGISRERVRQIEVRAFEKLQKAIKAAAVEQRMETEA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgtccaaccttccggctatcgggtccgaaagcaatctgtcccgctatctc
caggaaatccgcaagttcccgatgctggagccggagcgggaatacatgctggccaagcgg
tggcagcagcatgaggattccggcgccgcccaccagctcgtcaccagccacctgcggctg
gtcgccaagatcgccatgggctaccgcggctacggcctgcctttgtcggaactgatctcc
gaaggcaatgtcggcatgatgcaggcggtcaagcgcttcgatcccgaccgcggcttccgg
ctggcgacctacgccatgtggtggattcgcgcggcgatccaggaatacatcctgcacagc
tggtcgctggtgaagatgggcaccaccgccgcgcagaagaagctgttcttcaacctgcgc
cggctgaagggccagatgcaggcaatcgaggagggcgacctgtcgcccgagcaggtccag
gccatcgccaccaagctggacgtgccggaacaggacgtcgtcaacatgaaccggcgcctt
gccagccccgaccattcgctgaacgcgcccctgcgcgccgaaagcgagggcgaatggcag
gatttcctggtcgacgagaccgccagccaggaaatcacgctggccgaccgcgaggagctg
ggcaagcgccgcaagctgctggcgaacgccatgaccgcgctgaacgagcgcgagcgcgac
atcctgaccgaacgccgcctgcgcgaggcgccgacgacgctggaggatctgtcgcagaaa
tacggcatcagccgcgagcgtgtccgccagatcgaggtccgcgccttcgaaaagctgcag
aaggcgatcaaggccgccgcggtggaacagaggatggagacggaggcgtaa
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