Aliiglaciecola sp. LCG003: QR722_17730
Help
Entry
QR722_17730 CDS
T09143
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
alii
Aliiglaciecola sp. LCG003
Pathway
alii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR722_17730 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alii03019
]
QR722_17730 (pcnB)
Enzymes [BR:
alii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
QR722_17730 (pcnB)
Messenger RNA biogenesis [BR:
alii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QR722_17730 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
ORC_WH_C
Oxysterol_BP
Motif
Other DBs
NCBI-ProteinID:
WJG11345
LinkDB
All DBs
Position
4059327..4060727
Genome browser
AA seq
466 aa
AA seq
DB search
MTANNKKPQSTLLNPKVLTRGEHGISRKGISDNALKVLYRLNSAGFEAYLVGGCVRDLIV
GLHPKDFDVVTNATPDEVKELFKNCRLIGRRFRLAHVVFGREIIEVATFRGHHQSEPEKS
DKKSDKKSNKEVLGKQSQEGQILRDNVFGSIEEDAERRDFTVNAMYYRVTDFTVTDFANG
MDAIKNKRIELIGDPETRYREDPVRMLRAVRFAAKLDMTISDDSVEAIRRLGSLLSNIPP
ARLFEEVLKLFISGQGLQTYDLMNKYDLIQPLLPQLAPLLVDAQSRESQFIRQVLINTDN
RINTGMRVTPAFLYAAFLWYPIEEYCQKMMDEAGLNHFDAFNIAINDVLHRQVQRIMIPK
RFTTTMREIWQLQLRLPKRFGRRAYQMLEHPRFRAAYDFLLLRGQIEGGQLLELADWWTS
FQEASVEQRKTMLIKLRDEEGGAVRRPRKRRTNKKPKSTASNPSPQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgactgcaaataataaaaaaccgcaatctactttgcttaatcctaaagtattgacccgc
ggtgagcatggtatttccagaaaagggattagtgataatgcccttaaagttttatatcgt
cttaatagcgccggattcgaggcttatctggtaggtggttgcgtacgagatttgatcgtc
ggcttacaccctaaagattttgatgtggtaaccaatgccacgccagatgaagtaaaagag
ctatttaaaaattgccgcttaataggtcgacgctttcgcctcgcccatgtggtttttggt
cgtgaaatcatcgaagtagccacttttcgcggacaccaccaaagcgaaccagaaaaatcc
gataaaaaatcagacaaaaaatctaataaggaagttctgggcaaacaaagccaagaaggg
cagattttacgagacaacgtgttcggtagtatagaagaagatgccgaacgccgtgacttt
accgttaacgctatgtattaccgcgtgacggattttactgtaactgattttgccaatggt
atggatgcaatcaaaaataagcgcattgaattgattggtgatcctgagactcgctatcgc
gaagatcccgtcagaatgttaagagcggtaaggtttgcagccaaactagatatgaccatt
agcgatgattctgttgaagcaatcagacgtttaggctcattgctaagtaatatcccacca
gcacggctgtttgaagaagtccttaaactgttcatttcaggtcaaggattacaaacctat
gacttgatgaataaatacgaccttattcaacctttgctaccacaattagcccctttacta
gtcgatgcgcagagtcgagaaagccaatttatccgccaggtgttgatcaatactgacaac
cgcattaatactggcatgcgcgttacaccggcctttctatatgccgcatttttgtggtat
ccgattgaagaatattgtcagaaaatgatggatgaagctgggttgaatcattttgatgca
ttcaatattgccatcaatgatgtgttacatcgccaagtacagcgcatcatgatccctaaa
cgctttaccacgaccatgcgtgaaatctggcaattgcaattgcgtctacccaagcgtttt
ggtcgcagagcctatcaaatgttagagcatccgcgcttccgtgcggcctacgattttctg
ttattgcgaggtcaaatcgaaggtgggcaattacttgagctagccgattggtggacaagt
ttccaagaagcgagtgtcgaacagcgtaaaaccatgttaattaagttacgagatgaagaa
ggcggtgctgtccgtcgtccgcgtaaacggcggactaataaaaaaccgaaatcaacagca
tctaatccttcgccgcaatga
DBGET
integrated database retrieval system
