Austrofundulus limnaeus (annual killifish): 106526197
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Entry
106526197 CDS
T06063
Symbol
opn1sw
Name
(RefSeq) short-wave-sensitive opsin 1 isoform X1
KO
K04252
short wavelength-sensitive opsin
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
alim04030
]
106526197 (opn1sw)
G protein-coupled receptors [BR:
alim04030
]
Rhodopsin family
Vision
Opsin
106526197 (opn1sw)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
Motif
Other DBs
NCBI-GeneID:
106526197
NCBI-ProteinID:
XP_013876182
UniProt:
A0A2I4C868
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All DBs
Position
Unknown
AA seq
366 aa
AA seq
DB search
MGRHFHLYENISKVNPFEGPQYYLAPTWAFHLQTLFMGLVFFIGTPLNFIVLVATIKYKK
LRVPLNYILVNITLAGFIFVTFSVSQVFVATMRGYYFLGYTLCAMEAAMGSIAGLVTAWS
LAVLSFERYLVICKPFGAFKFGSTHAAAAVVFTWCMGVGCATPPFFGWSRYIPEGLGCSC
GPDWYSNCEDRSCGSYMKFLLVTCFILPLSIIIFSYSQLLGALRAVAAQQAESASTQKAE
KEVSRMIIVMVGSFVSCYGPYALTAIYYAYSQDENKDYRLVTIPAFFSKSSCVYNPLIYA
FMNKQVRTVESANTLISLYFEDFLKTFYIFVAIDPVISPTVHFKTVRHRFCLGMKLISSF
NPASKI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggggagacatttccacctgtacgagaacatctccaaagtcaacccctttgaggggccc
cagtattacctggccccaacctgggctttccacctgcagaccctcttcatgggcctggtc
ttctttattggtacgcctttaaactttatcgtyctcgtggccaccatcaagtacaagaag
ctcagagttcctctcaactacatcctggtcaacatcaccctggctggattcatctttgtc
accttctccgtcagccaggtgttcgtcgccaccatgaggggctactacttcctgggttac
accttgtgtgccatggaggctgccatgggctccatagcaggtctggtgacagcctggtcc
ctcgccgtcctgtcctttgagcggtacctggtcatttgtaaaccatttggagcctttaag
tttggcagcactcacgctgcagctgctgttgtcttcacctggtgcatgggggtgggctgt
gccacgccacctttcttcggctggagcaggtacatccccgaggggctgggctgctcctgt
ggacccgactggtactcgaactgtgaggaccgcagctgtggyagctacatgaagttcctg
ctggtcacctgcttcatccttcctctgagcatcatcattttctcctactcccagttactg
ggagctctgcgagctgttgcagcccagcaggcagagtcagcgtccacccagaaggctgag
aaggaagtctccaggatgatcatcgtcatggtggggtccttcgtcagctgttacgggccg
tacgctctgacagctatttactacgcttactctcaggatgaaaacaaagattatcgcctc
gtcaccatccccgcatttttctccaagagttcgtgtgtttacaacccgctgatctacgcc
ttcatgaacaaacaggtgaggactgtagaatcggcaaacacactcatctccttgtacttt
gaagatttcttgaagacgttttatatttttgttgccattgacccagttataagtcctact
gtccattttaaaactgtaaggcatcggttctgtttggggatgaagctaatctcatctttt
aatcctgcaagtaaaatctga
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