Alkalihalobacillus sp. LMS39: MM271_15295
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Entry
MM271_15295 CDS
T09200
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
alkl
Alkalihalobacillus sp. LMS39
Pathway
alkl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
alkl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MM271_15295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alkl03400
]
MM271_15295
DNA repair and recombination proteins [BR:
alkl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MM271_15295
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Motif
Pfam:
Ku
CDC24_OB3
Prok-RING_4
Vps39_2
zf-C3HC4_3
Rad50_zn_hook
Motif
Other DBs
NCBI-ProteinID:
UOE92597
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Position
complement(3079871..3080704)
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AA seq
277 aa
AA seq
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MHTMWKGSISFGLVNIPVKLHAATENKDIKLRNLHKECKSPINYEKTCPVCEKPIQAEDI
VKAYEYAKNKFVVLDDEELEKLKKDNEEKAVEIIDFVKLEEIDPIYFERTYFMAPNEGGS
KAYSLLRKALEDSGRIGVAKIIIRSKEHLAVIRVYKNTLVMETIHYPDEVRNVGEVPNVP
AEDNITKKELDTAMMLIDQLTTEFKPENYHDEYRTALMELIEEKKGKEDIVTGAEKKATP
NNVTDLMAALQASIDKTKKKKPATTRKRTTTKERKNA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgatgtggaaaggaagcataagttttggacttgttaatattccggttaagttg
catgctgcaacagaaaataaagatataaaattacgaaatcttcataaagaatgtaaatcg
cccattaattatgaaaaaacatgtccggtctgtgaaaaaccgattcaagcggaggacatt
gtaaaagcatatgaatatgccaaaaataaatttgtagtacttgatgacgaagaattagaa
aagctaaaaaaagataacgaagaaaaagctgtggaaatcattgattttgtcaaattagaa
gaaattgaccctatttattttgaacgaacatattttatggctccaaatgaaggcggaagc
aaagcgtattccttgttacgtaaagcattggaagactccggcagaattggggtagctaaa
attatcatccgttcaaaagagcatttagcggtgatccgcgtatacaaaaacacactagta
atggagacgatccattatccagatgaagtccggaatgtcggcgaagtgcctaatgtgcca
gcagaagataatataacaaaaaaagaattagacacagcgatgatgttaattgaccaatta
acaacagaatttaagccagaaaattatcatgatgaataccgaacagcattgatggaatta
attgaagagaagaaaggaaaagaggatatagtcacgggtgcagagaaaaaagcaacgcca
aacaatgttaccgatttaatggctgcgttgcaagcgtctatcgataaaacaaagaaaaag
aaaccggccacaacgagaaaacgaacaacaacaaaagaaagaaaaaatgcataa
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