KEGG   Alkalimarinus alittae: NKI27_13645
Entry
NKI27_13645       CDS       T08567                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
alkm  Alkalimarinus alittae
Brite
KEGG Orthology (KO) [BR:alkm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:alkm02044]
    NKI27_13645 (tssC)
Secretion system [BR:alkm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NKI27_13645 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 DUF2884
Other DBs
NCBI-ProteinID: UZE95105
LinkDB
Position
complement(3014198..3015685)
AA seq 495 aa
MSNYERMLATGNRAVSLEESSLLDQIVQQTKMKPQDDGYDVAKRGVGAFIAELLSDDSRE
ARVNKNLIDRMIAELDSKLSQQVDEVLHHKAFQKLESAWRGLKLLVDRTDFTQNIKISLL
NVSKEDLYDDFEDAPDVTRSGLYKLVYSSEYGQFGGEPVGGIIANYDLGPGAVDMKVMQN
CAAVASMSHAPFIAAAAPKFFGIDSYEELPNLKELHSIFEGPQYAKWQSFRESEDAKYVG
LTAPRFLLRAPYDAENNPVKAFEYNENIDGKHTNYLWGNTAFSFATRLTDSFAKYRWCPN
IVGPRSGGAVDDLPVHHFESLGEIESKIPTEILISDRREFELAEEGFIPLTMRKGSDNAA
FFSANSTMKVKYFGNNEEAKRSELNHRLSTQLPYMFIINRLAHYLKVLQRENIGSWKERT
DIENELNVWISNYIADQENPSAEVRSQRPLRAAKVTVNEVEGQPGIYKVGLSVRPHFKYM
GADFELSLVGKLEKS
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgtctaactacgaaaggatgttagccactggcaatcgtgccgtgtcgttagaagaaagc
tcgctgctcgatcaaatcgtgcagcagacaaaaatgaaaccgcaggatgatggctatgat
gttgctaagcgtggcgtaggcgcttttatcgctgaacttttaagtgatgatagccgagaa
gcgcgggttaataaaaacctaatcgatcgaatgattgctgagttggactctaagttgagt
cagcaggttgatgaggtgttacatcacaaagcgtttcagaaattagaatctgcttggcgc
gggttaaagttactcgtggatcgtactgactttacccagaacattaaaatatcgttgtta
aatgtatccaaagaagatttatacgatgacttcgaagatgctcctgatgtaacgcgttcg
gggttatataagttggtgtatagcagtgaatatgggcagtttgggggtgagccggtagga
gggattattgctaattatgaccttggtccgggtgccgtcgatatgaaagtgatgcagaat
tgtgctgccgtggcgtctatgtctcatgcgccttttattgcggcggctgcccctaagttt
ttcggtattgatagctatgaagaattaccgaatttaaaagagttacattcaatatttgaa
gggcctcagtatgccaaatggcagagctttagagagtctgaagacgctaagtatgtaggg
cttacagcaccaaggtttttgctaagagcaccctatgatgctgaaaataatcccgtaaaa
gcatttgaatacaatgagaatattgatggtaagcacacaaattatttatggggtaatact
gcattttcgtttgcgactcggctaacagatagctttgctaaatatcgctggtgcccgaat
attgttggtccgcgaagtggtggtgctgttgatgacttgcctgttcatcactttgaatct
ttgggcgaaattgaatctaaaattccgactgagattcttatttctgacaggcgcgagttt
gaattagcagaagaaggattcattcctctaacgatgcgtaaaggcagtgataatgctgcg
tttttctcagcaaactcaaccatgaaggttaagtattttggtaataatgaagaggcgaaa
cgaagtgagctaaatcatcgtttaagtacacagctgccttacatgtttatcattaaccgc
ttagcgcattacctcaaggtactccagcgagagaatatcggtagttggaaagagcgaaca
gacatagaaaatgagcttaatgtgtggataagcaactatattgcagatcaagaaaacccc
agtgctgaagtaagaagtcaacgcccgctgcgtgctgcgaaagtaacggttaatgaagtt
gaaggtcagccaggtatttataaagtagggttaagtgtgaggcctcattttaagtatatg
ggcgcagatttcgagttgtcgttagtgggcaagcttgaaaagtcttaa

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