Poseidonibacter parvus: LPB137_04465
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Entry
LPB137_04465 CDS
T04722
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
alp
Poseidonibacter parvus
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alp03016
]
LPB137_04465
Enzymes [BR:
alp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LPB137_04465
Transfer RNA biogenesis [BR:
alp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB137_04465
Prokaryotic type
LPB137_04465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF6664
DUF547
Motif
Other DBs
NCBI-ProteinID:
APW65145
UniProt:
A0A1P8KKT2
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All DBs
Position
918005..919069
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AA seq
354 aa
AA seq
DB search
MSQLQRYLNHSNIDVLFKQNKDDFVVTEIPLYEFSGEGEHLVLKIRKKDLATWDALEIIA
KFVGCRSRDIGYAGLKDKNAMTVQSISIHKQYEEKLKTFNHPNIKILDTTYHNNKIKVGH
LKGNSFFIRLKRVNVIDSRKIESALGSIVSLGMPNYFGFQRFGIDGDNYKKGKAIIEGTL
KEKRRNLKQMYINAYQSHLFNSWLSKRIEISKLVDAFEPKEIYQKLNLPLDVVKRMKKQK
HPLKIMTGDLLSHYPFGKIFTIEDLETESDKFFERDRVPTGLLSGKRVKNSVDLAYEIEK
EFEAPTGEDGARRFAWVFPSDVESNYKEDKNWMELKFTLPKGCYATELIAEIIH
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaattacaaagatacttaaaccattcaaacattgatgttttatttaaacaaaac
aaagatgattttgttgttacagaaataccgttatatgaattttcaggtgaaggcgagcat
ttagttttaaaaattaggaaaaaagatttagcaacttgggatgctttagaaataattgca
aaatttgttggttgtagaagcagagatattggttatgcaggacttaaagataaaaatgca
atgacagttcaaagtatttctattcataagcaatacgaagaaaagttaaaaacatttaat
catccaaatatcaagattttagatacgacttatcataataataaaatcaaagtagggcat
ttaaaaggtaatagtttttttattagacttaaaagagtaaatgtaattgattcaagaaaa
attgaaagtgctttaggaagtattgtatctttaggtatgccaaattactttggatttcag
cgatttggaattgatggtgataattacaaaaaaggcaaggcaattattgaaggaacttta
aaagaaaaaagaagaaacttaaagcaaatgtatataaatgcttatcaatctcatttattt
aattcttggctttctaaaagaattgaaatctcaaaacttgtagatgcttttgaaccaaaa
gagatttatcaaaaattaaacctacctctagatgttgtaaaaagaatgaaaaaacaaaaa
catccattaaaaattatgacaggagatttattatctcattatccgtttggaaagattttt
acaattgaagatttagaaactgaatctgataaattctttgaaagagatagagttccaact
ggcttattatcagggaaaagagttaaaaattcagtagatttagcttatgaaatagaaaaa
gaattcgaagcaccaacaggtgaagatggagcaagaagatttgcttgggtttttccttct
gatgttgaaagtaactataaagaggataaaaactggatggaattaaagtttacattacca
aaaggttgttatgcaactgaattaattgctgaaataattcactaa
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