Poseidonibacter parvus: LPB137_07475
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Entry
LPB137_07475 CDS
T04722
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
alp
Poseidonibacter parvus
Pathway
alp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB137_07475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alp03019
]
LPB137_07475
03016 Transfer RNA biogenesis [BR:
alp03016
]
LPB137_07475
Enzymes [BR:
alp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LPB137_07475
Messenger RNA biogenesis [BR:
alp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LPB137_07475
Transfer RNA biogenesis [BR:
alp03016
]
Prokaryotic type
tRNA degradation factors
LPB137_07475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
APW65700
UniProt:
A0A1P8KMA8
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All DBs
Position
complement(1500775..1502955)
Genome browser
AA seq
726 aa
AA seq
DB search
MSTVCEFELSKKQEIFEFGKVAKQANGSVLAKLGNAVVLATVVSEFDNPVSEDFTPLTVQ
YIEKTYAAAKLPGGFFKREAKASEFETLTSRVIDRSLRPLFPKGYVYPTTITVMVLSADK
EVDIQALALNAANAALYTSNLPVKKSVCGVRVAKIDGEYVANPKMSELENSTLDLYIAGS
KDELLMIEMKSISSTDMVEVDIEAFTKVHNSNEVNETNLVEAIAFAQKALFEANSAYEAG
FEEACKDMKEVELVEFKIPEEVIVYVRNTYSSNITAAIEKLAKSERATELKDVAKMISID
SYCEENEIEFSVVYEAVSVVKREIVRKMIVNDKVRADGRGLKDVRPISIDTNILPSAHSS
CLFTRGETQALVVGTLAGAKDGQMYEMLTEKSTLIDRFMLHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKKALEPTIDNDYSETVRLVSEILESNGSSSMATVCGGSLALKAAGVPISDL
VAGVAMGMVVEDGKYSVLTDIMGLEDHDGDMDFKVAGTAKGITALQMDIKLGGIELSVLE
EALLQAKEGREHILGLMETAAAEIIPSEALPLIEQFAIDPSKIMVVIGKAGSTIKEIIEK
FSVGIDLDRDSGNVKVSGNNKQNVLDACEHIKTISNNAVSRKPHSKDLDFEKLYKVDDVV
MGKVERIVDFGAFVALPKGGEGLLHISKISKQRVKNVSDVLSVADEIEIKVLKVTKDRIE
LASNSI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtttgtgaatttgaattaagtaaaaaacaagagattttcgagtttggaaaa
gtagctaaacaagcaaatggatctgtattagcaaaattaggaaatgcagttgtattagca
acagtagtaagtgaatttgataatcctgttagtgaagattttactcctttaacagttcaa
tatattgaaaaaacatacgcagcagcaaagttacctggaggtttctttaaaagagaagca
aaagccagtgaatttgaaacattaacttcaagagtaattgatagaagtttaagaccatta
tttccaaaaggttatgtttatcctacaactattactgtaatggttctaagtgcagataaa
gaagttgatattcaagcattagctttaaatgctgcaaatgctgcattatatacatcaaac
ttacctgttaaaaaatctgtttgtggtgttagagttgcaaaaattgatggtgaatatgta
gcaaatccaaaaatgagtgaattagaaaactcgactttagatttatatatagcaggttct
aaagatgaattattaatgattgaaatgaaatctatttcttcaactgatatggttgaagtt
gatattgaagcttttacaaaagttcataattcaaatgaagttaatgaaactaatttagtt
gaagctattgcttttgcacaaaaagctttatttgaagcaaatagtgcttatgaagcaggt
tttgaagaagcttgtaaagatatgaaagaagttgaattagttgaatttaaaattcctgaa
gaagttattgtttatgtaagaaacacttattcttcaaatattacagcggctattgaaaaa
ctagctaaaagtgaaagagctactgaacttaaagatgttgcaaaaatgatttctattgat
tcatattgtgaagaaaatgaaattgaattttcagttgtttatgaagcagtttctgttgtt
aaaagagaaatcgtaagaaaaatgattgtaaatgataaggtaagagctgatggtagaggt
ttaaaagatgttagaccaatttcaattgatacaaatattttaccttcagcacattcatct
tgtttatttactcgaggtgagacacaagcattagttgtaggaactttagctggagctaaa
gatggacaaatgtatgaaatgttaactgaaaaatcaacattaatagatagatttatgctt
cattataacttcccaggtttctcagtaggagaagctaaaccaatgtttggagtaggaaga
agagaattaggtcatggtaatttaggtaaaaaagccttagaaccaactattgataacgat
tattctgaaacagtaagattagtatcagaaattttagaatcaaatggttcttcatcaatg
gcaacagtatgtggtggttctttagcacttaaagcagctggtgttccaatttctgattta
gttgctggtgttgcaatgggtatggttgttgaagatggtaaatattctgtactaactgat
attatgggacttgaagatcacgatggtgatatggactttaaagttgcaggtacagcaaaa
ggtattactgctttacaaatggatattaaacttggtggaattgagttaagtgttttagaa
gaagcattattacaagcaaaagaaggacgagaacatattttaggtcttatggaaacagca
gcagcagagattattccaagtgaggctttaccattaattgaacaatttgcaattgatcct
agtaaaataatggttgttattggaaaagctggttcaacaattaaagaaataattgagaaa
ttctcggtaggaattgacttagatagagatagtggtaatgttaaagtaagtggaaataat
aagcaaaatgtattagatgcttgtgaacatattaaaacaatttcaaacaatgcagtttct
agaaaaccacattcaaaagatttagattttgaaaaactttataaagtggatgatgttgta
atgggtaaagtagaaagaattgttgactttggtgcttttgttgccttaccaaaaggtgga
gaaggactacttcatatttctaaaatatctaaacaaagagtaaaaaatgtttctgatgtt
ttaagtgttgcagatgaaatagaaataaaagtacttaaagttacaaaagacagaattgaa
ttagcttctaattcaatttaa
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