Poseidonibacter parvus: LPB137_13435
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Entry
LPB137_13435 CDS
T04722
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
alp
Poseidonibacter parvus
Pathway
alp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB137_13435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alp03400
]
LPB137_13435
Enzymes [BR:
alp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LPB137_13435
DNA repair and recombination proteins [BR:
alp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LPB137_13435
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
APW66790
UniProt:
A0A1P8KQG0
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Position
complement(2762057..2762902)
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AA seq
281 aa
AA seq
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MKYVGAHVSASGGVFNAPINAKAIGAKAFALFVKNQRQWAAKDFEPKVLDKWFEELEKSG
VQTKHILPHDSYLINLGHPVVENREKSLNGFLHEINRCEILKLDRLNFHPGSHLRKITED
ECLDNIAVSLNRAIDATNDVKLVIENTAGQGSNLGYKFEHLAHIIDKIEDKSRIGVCIDT
CHMFTAGYDIRTQEAYDKTWNEFDSIVGREYLMGMHINDSKPELGSRVDRHDSLGEGKIG
WDAFKFIMNDDRMDDIPLVLETINEDIWAQEIQALYDLVEK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgtaggagcacatgtaagtgcaagtggtggagtttttaatgcaccaataaat
gcaaaagcaattggagcaaaagcctttgctttatttgttaaaaaccaaagacaatgggct
gctaaggattttgaaccaaaagttttagataaatggtttgaagaattagaaaaatcaggt
gtacaaacaaagcatattttacctcacgattcatatcttattaatttaggtcatccagtt
gttgaaaatagagaaaagtctttaaatggatttttacatgaaataaatcgttgtgaaatt
ttaaaacttgatagattaaatttccatccaggttcacaccttagaaaaattactgaagac
gaatgtttagataatattgctgtatctttaaatagagcaatagatgcaacaaacgatgta
aaacttgtaattgagaacactgcaggtcaaggctcaaaccttggatacaagtttgagcat
ttagcacatattattgataaaatagaagataaaagcagaattggtgtttgtattgatact
tgtcatatgtttacagcaggttatgatattagaacacaagaagcttatgataaaacttgg
aatgaatttgattctattgttggacgtgaatatttaatgggaatgcatattaatgattca
aaaccagaactaggaagtagagttgatagacatgattctctaggtgagggtaaaattggt
tgggatgcttttaaatttattatgaatgatgatagaatggacgatattccacttgtttta
gaaacaattaatgaagatatttgggcgcaagaaattcaagcgctttatgatttagtagaa
aaataa
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