Arabidopsis lyrata (lyrate rockcress): 110227271
Help
Entry
110227271 CDS
T01578
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110227271
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aly01009
]
110227271
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aly03019
]
110227271
03036 Chromosome and associated proteins [BR:
aly03036
]
110227271
Protein phosphatases and associated proteins [BR:
aly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
110227271
Messenger RNA biogenesis [BR:
aly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
110227271
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
110227271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
110227271
NCBI-ProteinID:
XP_020876658
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MVDTIVPGDMACLDVDLLQLQEMSSFVLNSKPGFTQKLFDQWLSLPESHRQIGSLLKDAM
AGAPINVTGSASGSNSATIPSMFPAGSAPPLSPRSCGSPRTTKQRAPSNLGSTLKVVNEP
VKEPIPQFYFQNGRPPPSEIKEQCMFRINHFFYGHMDGLQIKEFKLVTREICKLPSFFST
SLFQKIDVNNTGFVTREAFIDYWVNGNMLIMDTTTQIFKILKQQNQNFIVKDDFKPLLKE
LLATHPGLEFLQSTPEFQERYAETVTYRIFYYINRSGNGRLTFRELRRGNLIDAMLHADE
EEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLMRYGNHALTYRIVDRIFSQVA
RKFTSKVEGKMGYEDFVYFILAEEDKSSEPSLEYWFKCIDLDANGIITRNEMQFFYEEQL
HRMECMAQEAVLFEDILCQMIDMIGPENESHITLHDLKGSKLSGNVFNILFNLNKFMAFE
TRDPFLIRQERENPTLTDWDRFAHREYIRLSMEEDVEDASNGSAEVWDESSLEAPF
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggtggatacgattgttcccggagacatggcttgtttggatgtagatttgttgcagctt
caagaaatgtcttcctttgttctaaattcaaaacctggattcactcaaaaactcttcgac
cagtggctttctcttcctgaatcccatcgacagattggatcattgcttaaggatgctatg
gctggagctcctataaatgttactggaagtgcatcgggttctaattctgccactatacca
tctatgtttcctgctggaagtgcccctccgctttcaccaaggagttgtggttcaccgcgt
acaaccaaacagagagccccttctaacttaggttctactctcaaagttgtcaacgagcct
gttaaagagccaatacctcagttttatttccaaaatggtcgcccaccaccaagcgagata
aaagagcaatgtatgtttagaatcaatcacttcttttatggtcacatggatgggttgcag
ataaaagaattcaaattagtcaccagagaaatctgcaagctcccatctttcttctccact
tcacttttccagaagatcgatgttaataatacaggttttgttactagagaagcatttatt
gattattgggtaaatgggaacatgttgataatggatacaacgacccaaatcttcaagata
ttaaagcagcaaaatcagaatttcattgttaaggatgatttcaaaccactacttaaagaa
ctgttggcgacacatcctgggctagagttcctgcaaagcacacctgaattccaagaaaga
tatgctgaaactgtcacctacagaatattttactacataaatagatctgggaatggtcga
cttacatttagggagctcagacggggaaacttaattgatgcaatgctacatgctgacgaa
gaagaagatatcaacaaagtgttgagatacttctcatatgagcatttctatgtcatatac
tgcaagttctgggagctggatacggatcacgatttcctgattgacaaagaaaatctaatg
agatatggaaaccatgctcttacttaccggattgtcgacagaatattctctcaggttgct
aggaagttcactagcaaagtggaagggaagatggggtatgaggactttgtctatttcata
cttgcggaagaagataaatcgtcagagcctagcctagaatattggtttaagtgcatagac
ttggatgcaaatgggattattacgcgaaatgagatgcaattcttttatgaagagcagttg
catcgaatggagtgcatggcgcaagaggctgttcttttcgaggatatcttatgtcagatg
attgatatgatcggaccagagaacgaaagccatataacgctgcatgacctgaaaggctca
aagctctctggaaacgtcttcaacatcctttttaatctaaacaaatttatggcatttgaa
acacgggatccgttcctcattcgtcaggagcgtgagaaccctacattgacagactgggac
cgttttgcacatagagagtatattaggctttcaatggaagaagatgttgaagatgcatcc
aatggaagtgctgaggtttgggatgagtcgtcactggaggctcccttctga
DBGET
integrated database retrieval system
