Arabidopsis lyrata (lyrate rockcress): 110228549
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Entry
110228549 CDS
T01578
Name
(RefSeq) uncharacterized protein LOC110228549
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
110228549
03029 Mitochondrial biogenesis [BR:
aly03029
]
110228549
Enzymes [BR:
aly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110228549
DNA replication proteins [BR:
aly03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110228549
Mitochondrial biogenesis [BR:
aly03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
110228549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pif1_2B_dom
VMAP-M12
Motif
Other DBs
NCBI-GeneID:
110228549
NCBI-ProteinID:
XP_020881885
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MCPGLVQTEWNKDINDEKINDGDHADIDIPENASLIECPDPIVTIVSQVYGDSFREQSSY
YSYCRDTVILCHTQSDVDQINAYMLSQLPGKEILSHCDDCLVPEDEDTPSPVDYMLIISS
MFSSVTVPGVPNQILRLKVGAPIMLLADVDPSRGLSTGTRLQILQLGDSMLVTRFATSQR
SPRPQEFLIEKMHMFSEKGFFTPMRRTQYPFTLAFAMTIDQSRGQTFSKVGLYLPKQVLS
PPGQRFLAISKVKAATGLTQVLITEEGEKPHVEAENVFLKKLF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccaggcctagtccaaactgaatggaataaggatattaatgatgaaaagattaat
gatggagatcacgctgatattgatatccctgaaaatgcgtcgctaattgagtgccctgat
cctatcgtaacaatagtgagccaagtttatggagactcttttcgtgaacagtcctcctac
tattcctattgccgcgacacggttattttgtgtcatactcaatctgatgtggatcagatt
aatgcctatatgctttcacaattaccaggtaaagagatattatctcactgcgatgactgc
ctagttccggaggatgaggataccccaagcccagtcgattacatgttaataatttcaagt
atgtttagtagcgtcacagtccccggagtgcctaaccagattttgagactcaaggttggt
gctcccatcatgttacttgctgacgttgatcctagccgtgggttaagtactgggactaga
cttcaaattcttcagttgggtgattctatgcttgtgaccagatttgcaacatcacaacgt
agtcctcgtccccaggaattcctgatcgaaaagatgcacatgttctctgagaaaggtttt
tttaccccaatgcggcgtacccagtatcctttcacacttgcattcgccatgactatagat
cagagtcgaggccaaacattttccaaagttggtctatatctaccaaaacaagtactgtcc
cctcctggacaaaggtttcttgccatatccaaagttaaggccgcaactggtttgacccaa
gttcttatcacagaagaaggtgagaaaccccacgtagaagccgaaaatgttttcttgaag
aagttgttttag
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