Arabidopsis lyrata (lyrate rockcress): 9304410
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Entry
9304410 CDS
T01578
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00450
Selenocompound metabolism
aly00970
Aminoacyl-tRNA biosynthesis
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
9304410
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
9304410
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
9304410
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aly03016
]
9304410
Enzymes [BR:
aly01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
9304410
Amino acid related enzymes [BR:
aly01007
]
Aminoacyl-tRNA synthetase
Class I (U)
9304410
Transfer RNA biogenesis [BR:
aly03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
9304410
Prokaryotic type
Other AARSs
9304410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
9304410
NCBI-ProteinID:
XP_002868338
UniProt:
D7MHB4
LinkDB
All DBs
Position
Unknown
AA seq
798 aa
AA seq
DB search
MEDDGKSNPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIY
ICGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQ
AIFKKLWDNKWLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLL
NPTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDRLEKYINETSVAGSWSQNAIQTTNAW
LRDGLRQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPEN
VELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGN
DVKDTNIPVEVWRYYLLTNRPEVSDTSFSWTDLQAKLNGELLNNLGNFVNRVLSFIAKPN
NAGYGSVIPDAHDAESHPLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNFY
LQTSQFWKLYKEDKPLCAIVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQFSLSD
ERGEVLLASKPWEILPPSHRIGTAQPLFKELENDEVTQYREKFAGSQADRRARDEAANLT
DQLNKTKLSDAKKQKASSSKGGGKPKPQPAADREITMARLDIRVGKIVKAERHPKADTLY
VEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAASSSDG
SKVELVEPPESANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTNENLVACYKDVPF
TTSAGVCKVSSISNGTIR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggcaagagcaaccccaagttaccgattcctggcaagagaaatatatta
atcaccagtgctttaccttacgtcaacaacgttcctcatctcggaaacatcatcggatgt
gttcttagtgctgatgtgtatgctagatactgtcgtctccgtggctataatgcgatatat
atatgtggaaccgatgaatatgggactgcaactgagaccaaagctttggaggagaattgc
actcccaaggaaatttgtgacaagtaccatgccattcataaagaagtttatgactggttt
gatataagttttgacaagtttgggcgaacttcaactccagaacagactgaagtgtgtcaa
gcaattttcaagaagttgtgggataacaagtggctttcagagaacaccatgcagcagctt
tactgcgatacatgcaagaagttcttagctgaccggcttgttgagggttcttgtccgttt
gaaggatgtaattatgattctgctcgtggagatcagtgcgaaaaatgtggaaagctcctg
aatcctactgaacttaaagatccaaagtgcaaggtctgtcaaaacacaccccgaattcgt
gacacagaccacctgtttattgagcttccgttactgaaagataggttggaaaagtatatt
aacgagacctctgttgctggatcttggagtcaaaatgctattcaaacgacaaatgcatgg
cttagggatgggcttagacagagatgcattacaagggatcttaagtggggagtgcctgtc
ccacatgagaaatataaggagaaagtcttctatgtttggtttgatgctcctattggatac
gtctcaataacgtcatgctacacatctgaatgggagaagtggtggaagaatcctgagaat
gttgagctttatcagtttatggggaaagacaatgtgccatttcacactgtgatgtttccc
tctacccagcttggaactggggaaaattggacactgatgaagacaatcagtgtgactgaa
tatttaaactacgaagacggaaagttctccaagagtaaaggtgttggagtgtttggtaat
gatgtaaaagatacaaatatacctgtcgaagtatggagatactacttgctgaccaacagg
cctgaggtgtctgacacatcgttttcatggactgatttgcaagcaaaactgaatggcgag
ttgctgaacaacctaggcaactttgttaatcgagttctgagttttatagcaaagcctaat
aatgcaggttatgggtcagtcattcctgatgctcatgatgctgaatctcatcctttaaca
aaatcactggcggaaaaggttgaaaagtttgtggcagagtatgttgaagccatggaaaag
gttaagctcaagcaggggctgaaaactgctatgctgatttcaagcgaagggaacttttac
ttgcagacaagccaattttggaaactttacaaggaagataaacctttgtgtgcaattgtt
ataagaactgctgctggtttagtacaccttcttgctcagttgttagaacctttcatgcca
tccttttcttgtgaggtatttaaacagctaaatttgcctccacaattttctctctccgac
gagaggggagaggtattactagcaagtaaaccatgggagattctgcctcctagccacagg
ataggcaccgctcaacctttgttcaaggagttggaaaacgatgaagtgacacagtacaga
gaaaagtttgctggaagtcaggctgatagacgtgctagggatgaagcagcaaatttgaca
gatcagcttaataaaacaaaactttcagatgccaagaaacaaaaggcatcatcatcaaaa
ggcggaggaaaaccaaaacctcaaccagctgctgatcgtgaaataactatggcaagactt
gatattcgagtcggaaaaattgtgaaggctgagagacatcctaaggcagatacattgtat
gttgaagaaattgatgttgggggtggtgaaattcgcactgttgttagtggactggtcaaa
tatatacctctagaggaaatgcagaatcgtatggtttgtgttctttgtaacttgaaaccg
gcgaaaatgagggatattgtgtcgcaagcaatggttcttgcagcttccagtagtgatgga
agcaaggtggagttagttgagccccctgaatctgctaatattggagagcgagttacattt
cccgggtttgaaggcgagccagacgatgtcttaaacccaaagaagaaagtatgggagaca
cttttggtggatctaaacacaaatgagaatctagttgcttgctacaaagatgttcccttc
actacatctgcaggtgtatgcaaagtttcatccatcagcaatggcacaatccggtaa
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