Arabidopsis lyrata (lyrate rockcress): 9307511
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Entry
9307511 CDS
T01578
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aly01002
]
9307511
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aly03021
]
9307511
04121 Ubiquitin system [BR:
aly04121
]
9307511
03036 Chromosome and associated proteins [BR:
aly03036
]
9307511
Enzymes [BR:
aly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
9307511
Peptidases and inhibitors [BR:
aly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
9307511
Transcription machinery [BR:
aly03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
9307511
Ubiquitin system [BR:
aly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
9307511
Chromosome and associated proteins [BR:
aly03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
9307511
SLIK complex
9307511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
9307511
NCBI-ProteinID:
XP_002871441
UniProt:
D7M3I7
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSARISFLKNLDPCNHLSDYKLRYGTDGYKSFNNLFRCFNDGRIKIKLQGFDIPRCSYCS
VYQKRLYICLICRSISCSSHILLHTQLNKGHDIAIDVERSELYCCACIDQVYDSEFDEVV
VSKQLIGLGMSVKSGADVVAVRSNKKRRLDSQLIIGSKFLVSPRDRREKWTFPLGLRGLN
NLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSAMFSGD
RTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSKCLYQDHEECQCIT
HKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSVNGFSPADCRKNRYSGGPSVNATM
PTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRK
TSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAV
VTHSGMLESGHYVTYLRLKGLWYRCDDAWINEVEEEVVRGCECYMLFYAQERVIQKAHKE
LSYQVISMADAFPFADC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaggatttcatttctgaaaaatctcgatccgtgcaatcacttatctgattat
aagcttagatatggtactgatggttacaaatctttcaataacttgttcagatgcttcaac
gatggaagaattaagatcaaacttcaaggattcgacatacccagatgcagttattgttct
gtttatcaaaagagactctacatctgtttgatctgtcgttccatttcttgttcaagtcat
atccttttgcatacccaattgaataaaggccatgatatcgccattgatgtcgaaagatct
gagctttattgttgtgcttgcatcgatcaagtgtatgattctgagttcgacgaggttgtt
gtgtctaagcagcttattggtttgggtatgtctgttaaatccggggctgatgttgttgcg
gttagatcgaacaagaagaggagattggattcgcaattgattatagggtccaagtttttg
gtctcacctcgagatcggagagagaaatggacgtttcctttggggttgagaggtttgaat
aatctgggaagcacttgttttatgaatgctgtgttgcaagcacttgttcatgctcctcct
ttgagaaacttttggttgagtggtcagcataatcgtgatctttgtcccagaaggacaatg
ggtttgttgtgtttgccttgtgatcttgatgttatcttctctgctatgttctctggtgat
cggactccttatagcccagctcatttgctttacagttggtggcagcactcaacgaatcta
gctacatatgagcagcaagattctcacgagttcttcatttcgctattggaccgcatccat
gagaatgaaggaaagtcgaaatgtctgtatcaagatcatgaggagtgtcaatgtattact
cacaaggcattctctggtcttttaagatcagatgtcacctgcacaacatgcggatccaca
tcaacaacatatgacccgtttatcgacatttcacttactttagattcagtgaatggattc
tctcccgctgattgcagaaagaacagatacagtggtggaccaagtgtgaacgcaaccatg
ccaactctctcgggttgcttagatttcttcacacggtcagagaaactcggtccggaccag
aaactaaactgccaaagctgtggagaaaagagagaatcttcgaaacaaatgtcaataaga
agacttcctctgcttctttgcttgcacgtaaagcgtttcgaacattctcttacccgtaaa
acctcgagaaaaattgatagctacttgcagtatccgttccgcctaaacatgtctccttac
ctctcttcctccatcatcggaaagcggtttgggaacagaatatttgcatttgatggagaa
ggcgagtatgacagttcatcatcatcatccccatcagcggaatttgagatatttgcggtt
gtaactcactcggggatgttggaatcaggtcactatgtgacgtatctgaggctcaaaggg
ttgtggtatagatgtgatgatgcatggatcaatgaggttgaagaagaagtggtgagagga
tgtgaatgttatatgttgttctatgcacaagaaagagtgattcaaaaagctcataaggag
ttgagttatcaagttatctccatggctgatgcatttccctttgctgattgctga
DBGET
integrated database retrieval system
