Arabidopsis lyrata (lyrate rockcress): 9311249
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Entry
9311249 CDS
T01578
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_N
zf-RRN7
TF_Zn_Ribbon
Rrn7_cyclin_C
GRDP-like
Motif
Other DBs
NCBI-GeneID:
9311249
NCBI-ProteinID:
XP_002875181
UniProt:
D7LQC1
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MLCRECDNDAFDEEDDGYFYCKRCGVQAEDLIQTGVDDGDLIGDGGGTHGAIYDPRYRRT
ITQPITPSQPRYTDDTIRYTHFKSQLESEIEKKKDLPREVKREPEIYLEKEPTEPVDFGA
ETLSYEDYYDEARDRYVKAFLMMITYQCDALVDKFNVTPLIIGLVGPISLRYVALSGVYD
DDWADKAIRDSELQSEDGEVKDAKRPKTQKAEPRNLDGKRAVTIWVSLLKKTLPLSSSLA
ISFLACHHAGAPVLPTDIVRWAREGKLPYLSCFIDIREQMGERSAACPVKASIMSRPFQI
ISAQMLEARAACIADIIGLPLSPVNFYGIASNYIKRLSIPEDKILELVRLIQNWSLPPEL
YLSKNELKLPTRVCVMSILIVAIRMLYNINGLGLWERSLEFVNASEADIDFEEFDSPVHD
EEVSNTNSGTAELSDVTKATKFDTEELLKNLEAKYYEVAAETLESEKDLLSYLSLGKNEF
FAGLEEDLPDDTYRTVDNLWNGYPKDEDFERCRTPPKRGRDWDDDVSLNQLSLEDSKFSD
GNNPCSSPSRRNESVSMDRDLSSSEHGESSSPENHHHQEEKLKERAIKRLITDMGDNLFC
YIPPRVKVKRLDYLQYVRKKEDGALIYTAHADYYILLRVCAKVAEIDVRNMHRGVLSFER
RLAWIEKRIDQVLHLPPPFMTCDHCCDGGNAGEDQDDS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgctctgcagagagtgcgacaacgacgcctttgacgaagaagacgacggatatttctac
tgcaaacgatgcggtgttcaggctgaagatcttatccaaaccggcgtcgacgacggcgat
ttaatcggtgatggtggaggtactcatggcgcaatttatgaccccagatatcgccgtact
ataacacaaccaatcactccttcacagcctcgttacacagatgacacaatacgttacact
cattttaaatctcagcttgaatctgaaatcgagaagaagaaggatttgccccgtgaagtg
aagagagagcctgagatttatctcgagaaagagccaacggagcctgtggattttggagca
gagactttaagttatgaggattattacgatgaagcaagagatagatatgttaaagctttt
cttatgatgattacttatcagtgtgatgctttggttgacaagtttaatgtcactcctttg
attattggtttggttggacctatctctttacgttacgtggctctctctggcgtttacgat
gatgattgggcggataaagccattcgtgattccgaacttcaatcagaagatggtgaagta
aaagatgctaagcggcctaaaacacagaaagccgagcctcgtaacttagatggtaaaaga
gcagtgacgatatgggttagtctgcttaaaaagactctgcctttatcgagttctttggcg
atatcttttcttgcttgtcaccatgcgggagcacctgttttacctacggatattgtgaga
tgggcacgagaaggaaagcttccgtatttgtcttgttttatcgatattcgagagcaaatg
ggagagcgatcagctgcgtgtccggtgaaagcaagcataatgtctaggccttttcagatt
atttctgctcagatgttagaagcacgagccgcttgcattgctgatattattggtttgcct
ttgtctcctgtaaatttctatggtatagcttcaaactatataaagcggttatctattcct
gaggataagattcttgaactggtgcgtcttatacagaactggtcactgcctccagaattg
tatctatcgaagaatgagctgaagcttcctacccgggtgtgtgtcatgtctattctaatt
gtagctatacggatgctttataacataaatggtttaggtctgtgggaacggagtttggag
tttgttaatgctagtgaggcagatatcgatttcgaagagtttgattctccagttcatgat
gaggaggtttcaaatacaaattcaggtactgcagagttgtcagatgtcacgaaagcaacc
aaattcgataccgaggagcttctgaagaaccttgaagctaaatattatgaggtcgctgca
gaaacccttgaatccgagaaggatctgctgtcatatctatcgctcgggaaaaacgagttc
tttgctggtttggaagaagatttacctgacgatacatacagaactgttgacaacctgtgg
aatggttatccaaaagatgaggatttcgaacggtgtaggactccacccaagagggggaga
gactgggatgatgatgtatcacttaaccaactttcattagaagatagcaaatttagcgat
ggaaacaatccttgtagtagcccttcaaggagaaacgaaagtgtatcaatggatcgtgat
ttatcttcttcagaacacggagaatcatcatcaccagagaatcatcatcatcaagaagag
aaattaaaggagagagcgataaaaagactaataacagacatgggagataacttgttctgt
tacataccacctcgtgtgaaggtaaagagactagattatctacaatatgtgaggaaaaaa
gaagatggagcattgatatacacggctcacgcagattactacattcttttgcgggtttgt
gctaaggtagctgagattgatgtgaggaatatgcatagaggtgtgttgagctttgagagg
agattggcttggattgagaaaaggatagatcaggttttgcatctacctccaccttttatg
acatgtgaccactgttgtgatggtgggaatgctggagaagatcaagatgattcatag
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