Arabidopsis lyrata (lyrate rockcress): 9313119
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Entry
9313119 CDS
T01578
Name
(RefSeq) putative pectate lyase 11
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00040
Pentose and glucuronate interconversions
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
9313119
Enzymes [BR:
aly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
9313119
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
9313119
NCBI-ProteinID:
XP_002875382
UniProt:
D7LPG2
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
MFRIMFSYSSNCFAYAFLLLLSIGNTVALSSSTLAHVQDPNLVVEEVNRSVFNASRRSLA
YLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRDGRIYVVTDPANDDPVNP
RPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITNGPCLKIHYAH
NIIIHGINIHDCKPGSGGMIKDQPYHTGLYIPSDGDAVAIFGGEHVWIDHCSLSNCDDGL
IDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRH
GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESQWRDWNW
RSEGDMLLNGAYFRESGAGSPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaataatgttttcgtattctagtaattgttttgcttatgcttttctacttctt
ctatcaatcggtaacacagttgcattgtcttcgagtactctggctcatgttcaagatcca
aatctagtcgttgaagaagttaacagaagtgtattcaatgcgtcaaggaggagcttggcc
tacctatcttgcagaaccggaaatcctattgacgattgttggcggtgtgacccgaattgg
gaaacaaaccgccaacggttagcagattgtgccattgggtttggcaaaaacgctatcgga
ggccgtgatggtcgaatctatgtagttacggatccggccaacgacgatccagtaaaccct
agacccggaactctaagatacgcagtcacacaagaagaaccattatggatcattttcaag
agagatatggtcattaggctcaaaaaagaacttatcatcacatctttcaagaccattgat
ggtagaggctcgagtgttcacataaccaatggaccatgcttaaagattcactatgcacat
aacatcatcattcatggcattaacatccatgactgcaaaccaggatcaggtggcatgatt
aaagatcagccatatcacaccgggttgtatatcccatccgatggagacgccgtggcgata
tttggaggggaacacgtgtggattgaccattgctcgttgtcgaactgcgatgatggactc
atagacgctatacatggttcaacggctataaccatatcgaacaatcacatgacgcaccat
gacaaggtcatgcttttagggcatagtgatagttacacgcaggacaagaacatgcaagtc
acaattgcgtttaaccatttcggagaaggactcgttcaaagaatgccacggtgcaggcat
ggatatttccatgtagtgaacaatgattatactcactgggaaatgtatgcaatcggtgga
agtgcttctccaacgatatacagccaaggcaatagatttcttgctcctaacacccgattt
aataaagaggttacaaaacatgaagatgcacccgaaagccaatggagagactggaattgg
agatcggaaggggatatgttattgaacggagcctatttccgcgagtccggtgctggatct
ccctctacttatgcaagagcttcgagcctgagtgcaagaccatcgtctcttgtgggttcc
atcacgacgacagcaggcactttgagttgtcggcgaggccgtcgctgttaa
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