Arabidopsis lyrata (lyrate rockcress): 9319321
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Entry
9319321 CDS
T01578
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly03030
DNA replication
aly03410
Base excision repair
aly03420
Nucleotide excision repair
aly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
9319321
03410 Base excision repair
9319321
03420 Nucleotide excision repair
9319321
03440 Homologous recombination
9319321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aly03032
]
9319321
03400 DNA repair and recombination proteins [BR:
aly03400
]
9319321
Enzymes [BR:
aly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
9319321
DNA replication proteins [BR:
aly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
9319321
DNA repair and recombination proteins [BR:
aly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
9319321
NER (nucleotide excision repair)
GGR (global genome repair) factors
9319321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
DUF4910
Motif
Other DBs
NCBI-GeneID:
9319321
NCBI-ProteinID:
XP_002883254
UniProt:
D7LB15
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MGVSLRHLSPSSFWVSRRPRVSSSILSFLVPRRRILCTRRIAITKGNAGYSTATDCGGSH
GFQHSGGHQRSSSVHFSGEWKLNLGSNTARMVPPTVKQAGAVSAWREEVNDKLRGRNGEH
ANNQDDAFGNYFRGFVPKLDDVQSYGNGQNFDYNLKPGTDITTLGRELNGFMQTNSVRGP
VIALPSKDIEVGGKTDVTLKGDEDAHGKRKPLNSDTSLDSASYKEIATISISNVEKCTNL
SKVRANLKKIYNRVLVVDNVSSAKETVAMLMNQYRNLVHACDTEVSRIDVKTETPVDHGE
MICFSIYCGSEADFGDGKSCIWVDVLGENGRDILAEFKPFFEDSSIKKVWHNYSFDNHII
RNYGIKLSGFHGDTMHMARLWDSSRRISGGYSLEALTSDPRVLGGTETKEEAELFGKISM
KKIFGKGKLKKDGSEGKLVIIPPVKELQMEDREAWISYSALDSISTLKLYESMKKQLQAK
KWFLDGNLISKQNMFDFYQEYWQPFGELLAKMESEGMLVDRDYLAQIEIVAKAEQEIAVS
RFRSWASKHCPDAKHMNVGSDTQLRQLFFGGISNSCNDEDLPYEKLFKVPNVDKVIEKGK
KRATKFRNIKLHRISDRPLPTEKFTASGWPSISGDTLKALAGKVSAEYDYTEGVSDTCLE
ENIGDDDCISLPDEVLETQHSNTTVESDTSAYGTAFDAFGGGESGKEACHAIAALCEVCS
IDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQA
FIASPGNSLIVADYGQLELRILAHLASCKSMKEAFIAGGDFHSRTAMNMYPHIREAVENG
EVLLEWHPQPGQEKPPVPLLKDAFASERRKAKMLNFSIAYGKTAIGLSRDWKVSIEEAQD
TVNLWYNDRQEVRKWQELRKKEAIQNGYVLTLLGRARKFPVYRSRAQKNHIERAAINTPV
QGSAADVAMCAMLEISKNQRLKELGWKLLLQIHDEVILEGPSESAENAKDIVVNCMSEPF
NGKNILSVDLSVDAKCAQNWYAGK
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctcttcgccacttgtctccttcctctttctgggtttcgcgtcgtcctcgc
gtttcttcttcaattctttcttttcttgtgcctcgccgtcgaatcctttgcaccaggaga
atagccatcacaaagggaaatgccggatattccactgctactgattgtggtggttcccat
gggtttcagcattcaggtggtcatcaacggtcatcctctgttcattttagtggagagtgg
aagcttaatttgggatctaacacggcgagaatggtaccaccaactgtgaaacaagctgga
gctgtaagtgcttggagggaggaagtcaatgataagttaagaggaagaaatggcgaacat
gctaacaaccaggatgatgcttttggtaattatttcagaggctttgtccccaaattagat
gatgtccaatcctatggaaacggccagaactttgattacaatctgaagcctggaactgat
attaccacacttggtagagaattgaatggctttatgcaaacgaatagtgttagagggccg
gttatagcattaccaagcaaggatattgaggttggggggaaaacagacgtgactctgaaa
ggagacgaggatgcacatggaaaacgaaaacctcttaacagtgatacgtctcttgacagt
gcaagctataaggaaatagcaaccatttccatttccaatgtggaaaaatgcaccaacctg
tcgaaagtccgagcaaacctcaagaaaatatataatagggttcttgttgttgataatgtg
tctagtgcaaaggaaaccgtggctatgctgatgaatcaatataggaatcttgtccatgct
tgcgatacagaggtgtccaggattgatgtgaagactgaaacacctgtggaccatggggag
atgatatgtttcagtatctattgtggatcagaagcagattttggagacggaaaatcatgt
atctgggtagatgtgcttggcgaaaatggaagggatatcttggctgagtttaagccattt
ttcgaggactcatccataaaaaaagtatggcataactacagctttgataaccacatcatc
agaaattatggaatcaagctttctggttttcatggtgatacgatgcacatggcacgattg
tgggattcatctagacggatatcgggtggttattcgctcgaagcacttacaagtgaccca
agagttcttgggggaactgagacaaaggaggaagcagaattatttggtaaaatatcaatg
aagaaaattttcggtaagggaaaattgaaaaaagatggatcagaagggaaattggtgatc
attcctcctgttaaagagctacaaatggaggatcgagaagcttggatttcctactcggcg
ttggattcgataagcactctaaagctttatgagagcatgaagaagcaattgcaagcgaag
aaatggtttcttgatggaaatctaatttcaaaacagaacatgtttgatttctaccaagaa
tattggcaaccttttggtgaacttcttgccaaaatggaatcggaaggaatgcttgtagat
agggattatttggcgcagattgagattgtagccaaagcagaacaagaaattgctgtttcc
aggttccgtagttgggcttcaaagcattgtccagatgcgaagcatatgaatgttggcagt
gacacgcaattgcgacagctcttttttggtggcatttctaacagttgtaatgatgaggat
cttccatatgaaaaacttttcaaagttcccaatgtggataaggtgattgaaaaaggaaaa
aagagagccacaaagttccggaatatcaaactacataggattagcgacaggcccttgccc
actgaaaagttcactgcctcaggctggccctctattagtggagacaccttgaaagcctta
gctgggaaagtctctgcagaatatgactatacagagggcgtttcagatacttgtctagaa
gaaaacattggagatgatgattgtatttcgctaccagatgaagttttagaaacacaacac
tccaataccactgttgaatcagacacatctgcttatggaactgcgtttgatgcgtttgga
gggggtgaaagtggaaaggaggcctgccatgctattgctgcattatgtgaagtttgctcc
attgattccttaatatcaaattttattcttcctttacagggaagtaatgtgtcaggaaaa
gatggtcgtgtccactgctccctgaatattaacactgaaactgggcgcttatcggctaga
aggccaaatttgcagaaccaacctgcattggagaaagatcggtacaagatccgtcaggcc
ttcatagcatcacctggaaattcacttattgttgctgattatggacagctggaacttagg
attctggcacatcttgctagttgcaaaagcatgaaggaagctttcatagctggtggagac
tttcactcaagaacagctatgaatatgtatccacatattcgtgaagcagttgaaaatggt
gaagtgctccttgaatggcatccacaacctggacaagagaagccaccagtgccattgttg
aaggatgcctttgcttctgagagaagaaaagcaaagatgcttaacttctcgattgcatat
gggaagactgctattgggctgtctagagattggaaggtatcaatagaagaagctcaagat
acagttaatctctggtataatgacagacaagaagtccggaaatggcaagaactacgcaag
aaagaagctatacaaaatgggtatgtactcactttgttgggaagggctcgtaaattccct
gtataccgttcacgtgcccaaaaaaaccatatcgaacgagcagcaatcaacactcctgtt
cagggaagtgcggctgatgttgctatgtgcgctatgctggagatatcaaaaaatcaacgt
ctaaaagagcttggttggaaattgcttcttcaaattcatgatgaagtaatcttggaagga
ccaagtgagtcagcggagaacgctaaagacatagttgtgaactgcatgtctgagcccttc
aacggcaagaatattctctcagtggacttatctgttgatgctaagtgtgctcagaactgg
tatgctggaaaataa
DBGET
integrated database retrieval system
