Alteromonas mediterranea DE1: amad1_04805
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Entry
amad1_04805 CDS
T02340
Name
(GenBank) pseudouridylate synthase, 23S RNA-specific
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
amaa
Alteromonas mediterranea DE1
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amaa03016
]
amad1_04805
Enzymes [BR:
amaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
amad1_04805
Transfer RNA biogenesis [BR:
amaa03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
amad1_04805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AFV84485
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All DBs
Position
1068817..1069614
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AA seq
265 aa
AA seq
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MNQTSNTIACEHREDVLKKQVEHQPLHLPVLYQDEHIIAIDKPPGLLVHRSPIDKHETVF
AVQTLRDLIGQHVFPAHRLDRPTSGVLVFSFSADTAAKLGKQMMDKQVVKQYHAIVRGFV
HHTGYIDYALKYRYDKIADKHKRPQQPPQPASTMYESLAKFDVPEPVGRYQSARYSLVRL
SPSTGRKHQLRRHMVHIRHPIIGDTTHGDGKQNKFAKSHFNFTHLALSCTQMGFSHPVTQ
KWITINGEMHSEMRQFADRLASFKV
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaacaagcaacactatagcctgtgaacatcgtgaagatgtgttgaagaagcaa
gtagaacatcagcccttgcacttacccgtgctatatcaagatgagcatattatcgcgata
gacaagccgccgggactgttagtccatagaagccctatcgataagcacgaaaccgtgttt
gctgttcagacgttaagggatctaattggccagcatgtttttccagcacaccgtttagat
aggccgacttccggcgttctggtatttagctttagcgctgacactgccgctaaactaggc
aaacagatgatggacaagcaggtggtaaagcaataccacgctattgttcgaggttttgtt
catcacactggttatattgattacgcgcttaaatatcgctatgacaaaatagcggataaa
cacaaaaggccccaacagccgccgcagcctgcttctactatgtatgagtctttagctaag
ttcgatgttcccgaacctgtgggtagataccaaagtgcacggtattcgctagtgagactt
tcacccagtacgggacgcaagcatcagctaagaaggcatatggtacatattcgtcaccct
atcattggcgatacgactcacggcgatggcaaacaaaacaaattcgctaaaagccacttt
aattttactcatttggccttaagttgtactcagatgggattttctcaccctgttactcaa
aaatggataacgattaatggtgagatgcatagcgaaatgcgacaatttgcagataggcta
gcatcgttcaaggtttaa
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