Alteromonas mediterranea DE1: amad1_06870
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Entry
amad1_06870 CDS
T02340
Name
(GenBank) two-component system response regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa02020
Two-component system
amaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
amad1_06870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
amad1_06870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
amaa02022
]
amad1_06870
Two-component system [BR:
amaa02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
amad1_06870
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA_16
AAA
AAA_2
HTH_8
Mg_chelatase
AAA_3
AAA_assoc_2
AAA_19
nSTAND3
AfaD
TIP49
T2SSE
MCM
PK_C
Motif
Other DBs
NCBI-ProteinID:
AFV84885
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Position
1526602..1527942
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AA seq
446 aa
AA seq
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MSEKASSNPNLLLVDDDKSLLRLLTIRLEGEGYDVTAVEDGQSALRKLQNDSFDVVLSDL
RMPGLDGLSLFEEIMGIRKDIPVILMTAHGTIADAVAATQRGVFGFLPKPVDHDELRTLL
QKALSQSQAAQPGDWAKDIITRSPEMLNVLDQAFRIAKREVSVLISGASGTGKELLANAI
HKASNRSDKPFVAINCGALPENLLESELFGHAKGAFTGAIAAHPGLFREADGGTLFLDEI
GDMPMTLQVKLLRALQERQIRPVGSSKHVDIDVRIISATHKDLHKEMEESTFREDLYYRL
NVVNLKLPSLKSRSEDIPLLARSLLQQSAQRHGVNVSQFSDDAMQQLVTSSWPGNVRQLV
NVVEQCVALTQTPVIPLHLVEQALSATKQSWPTLTEARDAFEQQYLHKLLKMTDGNVTRA
AELAGRNRTDMHKLMKKHELDAADFR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaaaaggcgagtagtaaccctaacttattgttggttgatgatgataaaagctta
ttgcgcttattaaccattcgcttagaaggcgaaggttatgacgtcacggcagtcgaagat
ggccagtctgccctacgcaaactgcaaaatgacagctttgatgtcgtgttaagcgacctg
cgtatgccgggtcttgatgggttaagcctgtttgaagaaataatgggaattaggaaagat
atccccgttattctaatgacagctcacggcaccattgccgatgcagtggcggcaacgcag
cgcggcgtttttggtttcttacctaagcctgtggatcacgacgaactacgcactttactt
caaaaagcgttaagccagtctcaagctgcgcagccgggagactgggcgaaagatatcatt
actcgttctccagaaatgctcaatgtgttagaccaagcttttcgtatagctaaacgggaa
gtgtcagtgctcataagcggagctagcggcacgggaaaagagctgttagccaatgctatt
cacaaggctagcaatagaagcgataaaccatttgtagccattaactgtggcgcattgcca
gaaaaccttcttgaatcagaattatttggtcacgcaaaaggcgcgttcactggagccatt
gccgctcatcccgggttatttagggaagccgacggcggcactttatttttagacgaaatt
ggcgatatgcccatgacgcttcaagtgaagttgttaagagcgctccaagaacgtcaaata
cgcccagtgggcagtagtaaacatgtcgacatcgatgtgcgtatcatttcagccacccac
aaagacctgcacaaggaaatggaagaaagcacgtttagagaagacttgtattaccgctta
aacgtggtgaatttaaaacttccgtctctaaaatctcgtagcgaagacattccgctgttg
gcgcgttctttattacagcaaagtgcgcagcgccacggtgttaacgttagtcagttttct
gatgacgctatgcagcagctggtaacttcatcttggccgggtaacgtacgtcaattagtc
aatgttgtagagcagtgtgtagcattaacgcaaacgccggtgatcccacttcaccttgtt
gagcaggcactgtctgctaccaagcaaagctggccaacactaaccgaagcgagagatgcc
ttcgagcagcagtacctacataagttactaaaaatgactgacggtaacgtaacgcgggcc
gctgaactggctggtagaaaccgcacagatatgcataagcttatgaaaaaacatgagtta
gatgcggccgatttcaggtag
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