Alteromonas mediterranea DE1: amad1_15405
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Entry
amad1_15405 CDS
T02340
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amaa
Alteromonas mediterranea DE1
Pathway
amaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
amad1_15405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaa03400
]
amad1_15405
Enzymes [BR:
amaa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
amad1_15405
DNA repair and recombination proteins [BR:
amaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
amad1_15405
Prokaryotic type
amad1_15405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
AFV86575
LinkDB
All DBs
Position
complement(3465421..3466086)
Genome browser
AA seq
221 aa
AA seq
DB search
MTSLTWQSALGNEKQKEYFVELLARVKQAREAGSVIYPPQPDVFNALKYTPLDKVNVVIL
GQDPYHGPNQAHGLCFSVQAGVKTPPSLKNMYKELLTDIDGFVEPNHGTLTSWAEQGVLL
LNTVLTVEQGKAHSHAKWGWETFTDKVIDVVNANCENVVFLLWGSHAQNKGKHIDREKHK
VLHAPHPSPLSAHRGFLGCKHFSQTNEYLVEKGKTPINWQV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgacatcactaacatggcaaagcgcgctaggtaacgagaaacaaaaagagtactttgtt
gagttacttgcgcgcgtaaagcaagcgcgtgaagcgggtagtgttatttacccgcctcag
cctgatgtattcaatgcgctaaaatacacgccgctcgataaagttaatgtggtgatacta
gggcaagatccttatcacggccctaatcaagcccacggcctttgtttttctgttcaagca
ggtgtgaaaacgccgccgtcgcttaaaaacatgtacaaagagctattgaccgatatcgac
ggctttgtcgagcctaatcacggtacgctcacgtcatgggcagagcaaggtgtgttgtta
cttaataccgtacttaccgtagagcagggcaaggcacacagccatgcgaagtgggggtgg
gaaaccttcaccgacaaagttatcgatgtagtaaatgcgaactgcgagaacgtggtattt
cttttgtggggcagtcatgcgcaaaataagggtaagcatatagaccgcgaaaaacacaaa
gtgttacacgcaccgcacccttcgccgctttcagcccatagaggctttctagggtgtaag
cattttagccaaaccaacgaataccttgttgagaaaggcaaaaccccaatcaactggcag
gtgtaa
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