Alteromonas macleodii ATCC 27126: MASE_19550
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Entry
MASE_19550 CDS
T02246
Name
(GenBank) igma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amac
Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amac03021
]
MASE_19550
Transcription machinery [BR:
amac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MASE_19550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
GerE
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AFS39392
LinkDB
All DBs
Position
complement(4597459..4597965)
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AA seq
168 aa
AA seq
DB search
MGQGFEDVFAQYGAILSRVANSYEANEAMQQELLQEIAIAVWQGLSRFKGDSSVKTYILK
IAHNRAVTHVANQVKRLDTHQYDHDDLGSDRFVSTTHSPEEMSSQHQSLERLLRAVRALP
LQSRQVLTLSLEGLSYDEIADVCGLTKNHVGVILKRAKQSIMQEQPHA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
ttggggcagggttttgaagatgtttttgcgcaatacggggcaatactgagccgtgtagcc
aacagctatgaagcaaacgaagcgatgcagcaagaattattgcaagaaattgctattgcc
gtctggcaggggctgtctcgctttaagggcgatagcagcgtgaaaacctatattttgaag
atagctcataaccgcgcagttactcacgtagcaaatcaagtgaagcgtctcgatacccat
caatatgaccacgatgatttgggctctgacaggttcgtgagtactacccattcaccagag
gaaatgtctagtcaacaccagtcattagaacgcctacttcgcgcggtacgggcacttcca
ttgcagtcaagacaagtgctaacgctttctcttgaaggcttaagttacgatgaaattgca
gacgtctgtggtctgactaaaaatcatgttggtgtgatattaaagcgcgccaaacaaagt
atcatgcaggagcaaccgcatgcataa
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