KEGG   Aquitalea magnusonii: DLM_0409
Entry
DLM_0409          CDS       T05698                                 
Name
(GenBank) CRISPR-associated helicase Cas3, Yersinia-type
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
amah  Aquitalea magnusonii
Brite
KEGG Orthology (KO) [BR:amah00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amah02048]
    DLM_0409
Enzymes [BR:amah01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DLM_0409
Prokaryotic defense system [BR:amah02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    DLM_0409
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C Cas3_HD DEAD
Other DBs
NCBI-ProteinID: BBF84081
UniProt: A0A3G9GCY4
LinkDB
Position
complement(409354..412698)
AA seq 1114 aa
MNILLISQCDKRALTETRRILDQFAERKGDRSWQTPITQAGLETLHRLLRKTARKNTAVA
CHWLRGRDHAELLWIVGDARRFNAQGATPTNTTQRNVLRAQDENDWLSGEDIRLMAGLAA
LFHDLGKACQAFQQRLRSDKPQPANLYRHEWVSLRLLQGFVGSDDDAGWLTRLQNPSQMT
TAVWESCLQQAGLRDGMDPGAADKQPFQPGALPPLAAAIAWLVLSHHRLPLTNTEPITAN
QLGTGLQALDHNWNQPCDPVSKTDATPYWYFPYGLPCNDSTWCTRVAKLAGQLAARPSGT
IWLDEVYPLHLARLTLMLADHHFSSQTVKQSWQSAQEKKIAFANTLRRDPALPAGTCRRF
NQTLPEHLTGVARHALHAAAALPDVARALPALGRCRALLKRSTDPRFSWQNKAHDMASSL
RQRAASQGAFIVNLASTGGGKTLGNARIMHALANPDTGMRCAFALGLRTLTLQTGQAFRE
RLQLSTEQLAIRVGGSASRELFELQAQEAEASGSASSQPLLDEENPVLFDGQPDHPLLQQ
LSHDPQFNALLAAPVLVCTIDHLTPATEATRGGRQIAPMLRLMSSDLVLDEPDDFSVEDL
PALTRLVYWAGLLGSRVLLSSATLPPALVQCLFDAYQAGRHQFQRHRGMPGQALNICCLW
VDEQNCHAADCPDSTSFAASHQQFAANRAHWLAGQAVRRNAVLMSLAGIPRQHSEMFEPL
ASLLRQQSIQLHTHNHDTDPVSGKRVSIGLIRLANISTIYPLAQALYAQDAPDGVQLHLC
VYHAQYPLLLRSAIERQLDAALTRHNPQALFTLPDIRHRLDGSSAADHVFIVLSSPVSEV
GRDHCYNWAIAEPSSMRSLIQLAGRVRRHWPQPWSEGNLLILQYNLAAWQGKKPAYCRPG
FENKDFPLDETDLSILLRAEEYQHPDSRPRLLARPEAEQRPTHSLTDLEHHRLQVDLNQT
HTPGLRRNSTGEPRLCAATCWQWPHAMLHAALQRKQPFRLSHGDEWELALLPDEDSASGL
SLLRLEQGKQRDPISWLQSNHLLHLIADHTLLCGKGIRPWGSSDYLTELEQLASTLDMPL
EDCARRYGRLRLRADKDSDKGWLFHPALGFGRKR
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgaatatcctgcttatttcccaatgcgacaaacgcgcgctgactgaaacacgccgtatt
ctggaccagtttgccgaacgcaagggcgaccgcagctggcaaacccccatcacccaggcc
gggctggaaaccttgcaccgcctgctacgcaaaaccgcgcgcaagaatactgccgtggcc
tgccattggctgcgcggccgggaccacgcagaactgctgtggattgtcggcgatgcccgt
cgcttcaatgcgcaaggtgccacccccaccaataccacgcagcgtaatgtgctcagggca
caagacgaaaatgattggttgagcggcgaggatatccggctgatggccgggctggccgcg
ctatttcacgacctgggcaaagcctgtcaggcatttcaacagcggctgcgcagtgacaag
cctcaacccgccaatctctaccggcatgaatgggtgtccttgcgcctgctacagggcttt
gtcggcagcgacgacgacgctggctggctgacacgcctgcaaaacccctcacagatgaca
accgctgtctgggaaagctgcttgcaacaagccggtttacgcgatggcatggatccgggc
gcagcagacaagcagccgtttcagccgggggcattgccaccgctggccgccgccatcgcc
tggctggtgctcagccaccaccgcctgccactgactaatactgagcccatcaccgccaat
caacttggcaccggcctgcaggcactcgatcacaactggaatcagccttgcgacccggtc
agcaaaaccgacgccacaccgtattggtactttccctacggcctgccctgcaacgacagc
acatggtgtacacgggtggccaaactggccgggcaacttgccgccagaccaagcggcacc
atctggctggacgaggtgtacccgctgcatctggcacgcctcaccctgatgctggccgac
caccatttttccagccaaaccgtcaagcaaagctggcagagcgcacaggaaaaaaagatt
gcctttgccaacaccctgcgccgcgaccctgccttgccagcggggacgtgccgccgcttc
aaccagaccctgccggagcacctgaccggcgttgcccgccatgccttgcatgccgctgcg
gccttgcctgatgtcgcccgcgccctgccagcactgggtcgctgccgggctttgctaaag
cgcagcaccgacccacgctttagctggcagaacaaggcccatgacatggccagcagcctg
cgccagcgcgccgccagccaaggggctttcatcgtcaacctggcctccaccggcggcggc
aaaaccctgggcaatgcccgcatcatgcatgcactggctaatccggataccggcatgcgc
tgtgcctttgcccttggcctgcgcaccctcaccctgcaaaccggccaggcctttcgcgaa
cggctgcaactgagcacagagcaactggctatccgcgttggcggcagcgccagccgggaa
ttgtttgaactgcaagcgcaggaagcggaagccagtggctcggcatcaagccagccactg
ctggacgaagaaaatccggtgctgtttgatggccagcccgatcaccccttgttgcaacag
ctcagtcacgatccgcaattcaacgccctgctggccgccccggtactggtgtgcaccatc
gaccacctcaccccggccaccgaagccacgcgcggcgggcgacaaatcgcccccatgctg
cggctgatgagttccgatctggtgctggacgaaccggatgacttttcggtggaagacctg
cccgccctcacccggctggtttactgggccggactgctgggcagccgggtgctgctgtct
tccgccaccctgcccccggcactggtgcaatgcctgtttgatgcctatcaggccggacgc
catcaatttcaacgtcaccgtggcatgccgggccaggcgctcaacatttgctgcctgtgg
gtggatgagcaaaactgccatgcggcagactgcccggatagcaccagttttgccgccagc
catcagcagtttgccgccaaccgtgcccactggctggcaggccaggcggtacgccgcaat
gcagtactaatgtcacttgcaggcattccgcgtcaacacagcgagatgtttgaaccactg
gccagcctgctacgccagcaatccatacagctacatacacacaaccacgacaccgaccct
gtcagcggcaaacgggtcagcatcgggctgatccgcctggctaatatcagcactatttat
ccgctggcccaggcactgtacgcgcaagacgcaccggatggcgtgcagcttcatctgtgt
gtttaccacgcgcaatacccattgctgctgcgctctgccatagaacggcagctggacgcc
gccctcacccggcacaacccgcaagcactgttcacgctgccggacatccgccaccggctg
gatggcagcagcgctgccgaccacgtattcattgtgctgtcgtccccagtcagcgaagtg
ggccgcgaccactgctacaactgggcgattgccgaaccctcctccatgcgctcgctcatc
caactggcaggccgggtgcgccgccactggccacagccatggagcgaaggcaatctgctg
atattgcaatacaacctggccgcctggcagggaaagaaaccggcctattgccgccccggc
ttcgaaaacaaggatttccccctggatgaaacggacctgagcatcttgctgcgcgccgaa
gaataccagcacccggactcccgcccgcgcctgctggcccgccccgaggcagaacagcgc
cccacccacagcctgacagacctggaacaccaccgcctgcaagtcgacctcaaccagacc
cacacaccggggctgcgccgcaacagcactggcgaaccaaggctatgcgccgccacctgc
tggcaatggccgcatgccatgctgcacgccgccctgcaacgcaagcagcccttccgcctg
agccatggcgacgaatgggaactggcattgctaccggatgaagacagcgccagcggcctc
agcctgttgcgcctggaacaaggcaagcagcgcgacccgatcagctggctgcaaagcaat
cacctgctgcacctcattgccgatcacaccctgctgtgcggcaagggcatccgcccctgg
ggcagcagcgactatctgaccgagctggaacaactggccagcacactggacatgccactg
gaagattgcgcccggcgctacggcaggctgcgtttgcgcgccgacaaggacagcgataaa
ggctggctgtttcatccggcactggggtttgggcgcaaacgctag

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