Akkermansia massiliensis: J5W79_07510
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Entry
J5W79_07510 CDS
T09439
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amak
Akkermansia massiliensis
Pathway
amak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5W79_07510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amak03400
]
J5W79_07510
Enzymes [BR:
amak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J5W79_07510
DNA repair and recombination proteins [BR:
amak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5W79_07510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QWP72214
LinkDB
All DBs
Position
complement(1798298..1799269)
Genome browser
AA seq
323 aa
AA seq
DB search
MSAGLPQHLTLDYLRALLSRGVEKAAVTEEARTVLRKWVMDARWIARGEIPSSVSAPPVS
GETQPPPEIPGQPPDSVDEVSFGNELRDILNGVQPGRTEEEAALPRHISFALEGETEEEK
LSSLRELVVNWPPLRNMESLRDTPVFSSGSPRADIMMVTDAPGLYEEKQGVPLAGPSGQK
LDAMLKAMGLSRTDIYLTHLVKYRPALPRQLTNNRPPTDREIEVSLPILREEIMLVRPKV
VVALGAIAARGILQSGETPLSALRGTFHTAFDTPVRVTYNPSYLLRTEDISEKRKVWEDM
LCVMEQAGLPISEKQRSYFLPKK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggcctgccccaacacctcacgctggactatctgcgcgccctgttatcccgg
ggcgtggagaaggctgccgtcacggaggaggccagaacggtcttgaggaaatgggtcatg
gacgcacggtggatcgccaggggggaaatcccctcttccgtttccgccccccctgtttcc
ggagaaacgcagccgccgccggaaattccaggccagccgccggactccgtggatgaagtt
tccttcggcaacgaactccgggacatcctcaacggagtacagccgggcagaacggaggag
gaagccgcgctgccccgccatatttcctttgccctggaaggtgaaacggaggaagagaaa
ctgtcctccctccgggaactggtcgtcaactggccgccgcttcggaatatggagtccctg
cgggacacgcccgtcttttcctccggcagtcccagggcggacatcatgatggtcacggac
gcccccggcctgtatgaagaaaagcagggcgttcccctggccggcccctccggacagaag
ctggacgccatgctgaaagccatggggctttcccgtacggacatttacctgacccatctg
gtcaagtaccgccccgccctcccccgccagcttaccaacaaccggccgcccacggaccgg
gagatagaggtgtccctccccattctccgggaggaaatcatgctggtgcgcccgaaagtg
gtggtagccctgggcgccatcgcggccaggggcatcctccaatccggagagacgccgctt
tccgccctgagggggacgttccacacggctttcgacacgcctgtgcgcgttacttacaat
cccagctacctcctccgcacggaggatatttcagaaaaacgaaaggtttgggaagacatg
ctgtgcgtcatggaacaggccggcctccccatttccgaaaagcaacgttcctatttcctg
cccaaaaagtaa
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