Alteromonas mediterranea U4: I607_12645
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Entry
I607_12645 CDS
T02720
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
amal
Alteromonas mediterranea U4
Brite
KEGG Orthology (KO) [BR:
amal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amal03019
]
I607_12645 (rnc)
03009 Ribosome biogenesis [BR:
amal03009
]
I607_12645 (rnc)
03036 Chromosome and associated proteins [BR:
amal03036
]
I607_12645 (rnc)
Enzymes [BR:
amal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
I607_12645 (rnc)
Messenger RNA biogenesis [BR:
amal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I607_12645 (rnc)
Ribosome biogenesis [BR:
amal03009
]
Eukaryotic type
90S particles
RNase
I607_12645 (rnc)
Prokaryotic type
rRNA processing factors
I607_12645 (rnc)
Chromosome and associated proteins [BR:
amal03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
I607_12645 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGP86314
LinkDB
All DBs
Position
complement(2835598..2836284)
Genome browser
AA seq
228 aa
AA seq
DB search
MQGIDKYLRLYRAIGYTFNNEALLEQALTHRSAAKQHNERLEFLGDAILGMIIGETLFKR
FPTVPEGKLTRMRSTLVKGDTLAELAKEASVGELLNLGPGELKSGGHRRSSILADAVEAI
LGAIYLDSGMDEVRGVIDRLWESRINQLDPNAHPKDSKTRLQEFLQGRKQALPTYEVLSI
SGKDHAQTFEVCCKVESLPDAVVASGNSRRKAEQEAARLTLEKLDDNA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaattgataaatatcttcgcttatacagggcgataggctacacatttaacaat
gaagcgttgttagaacaagcgcttactcaccgaagtgccgctaagcagcacaacgagcgc
ttagagtttttaggtgatgccattttgggcatgattataggcgagaccttatttaagcgc
tttcctactgtgccagaaggcaagctcaccagaatgcgttcgaccttggttaaaggtgat
acgctggcagagttggccaaagaagccagtgtgggggagctgctcaacttaggtccaggt
gaactgaaaagtggcggtcaccgcagaagttctattttggccgacgccgttgaagctatc
ttaggtgctatctacctcgattcaggaatggacgaagtacgaggcgttatcgacaggcta
tgggaaagtcgcattaatcaattagatcctaatgcacacccaaaagacagtaagacgcgc
ctgcaagagttcttacaagggcgcaaacaggcgctgccaacctatgaggtgctgtctatt
tcaggcaaagatcacgcacagacatttgaagtgtgctgtaaagtagaaagtctaccagac
gcggttgtggcgtctggcaatagtcgtcgtaaggcagaacaagaagctgctcgtttaaca
ttggagaagcttgatgacaacgcatga
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