Algicella marina: GO499_01280
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Entry
GO499_01280 CDS
T08414
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
amaq
Algicella marina
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaq03021
]
GO499_01280 (rpoH)
Transcription machinery [BR:
amaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GO499_01280 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HABP4_PAI-RBP1
HTH_19
YbjN
Motif
Other DBs
NCBI-ProteinID:
QHQ33908
UniProt:
A0A6P1SU02
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All DBs
Position
234513..235406
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AA seq
297 aa
AA seq
DB search
MSYTNLPAPSPEQGLSRYMQEIRKFPMLEPEQEYMLAKAWVDHEDKDAAHQLVTSHLRLA
AKIAMGYRGYGLPTAEVVSEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRSW
SLVKMGTTAAQKKLFFNLRKAKNKIGALEEGDLRPENVARIATELNVTEDEVVSMNRRLS
GGDASLNAQIKTDGEGAAEWQDWLQDEDADQASAYAEQDELESRRAMMEAAMGELNERER
HVLMERRLKDDPMTLEDLSKVYDVSRERIRQIEVRAFEKLQKAMTAMAREQGMALSA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagctatacaaaccttcctgcgccgtcgcccgaacaggggctgtcccggtacatgcag
gagatccgcaaattcccgatgctcgagccggagcaggagtacatgctggcgaaggcgtgg
gtggatcatgaagacaaggacgccgcccaccagctggtgacgtctcacttgcgactggcg
gcgaagatcgcgatgggatatcgcggctacggcctgccgactgcagaagttgtttcagag
gccaatgtcggcctgatgcaggcggtcaaacgcttcgacccggaaaagggtttccggctg
gcgacctatgcgatgtggtggatccgcgcttcgattcaggagtatatcctgcggtcatgg
agccttgtaaaaatgggcacgacggccgcgcagaaaaagttgttcttcaacctccgcaag
gcaaagaacaagatcggcgcgctggaggaaggcgacctgcgtccggaaaacgtggcgcgt
atcgccacggaactgaatgtgaccgaggatgaagtcgtctccatgaaccgacgtctctcc
ggtggcgatgcttctctgaacgcccagatcaagaccgatggcgaaggggctgccgagtgg
caggactggctgcaggacgaggatgccgatcaggcctccgcttatgcagagcaggacgaa
cttgaatcacgtcgggcaatgatggaagcggccatgggcgaactgaatgagcgcgaacgt
cacgtactgatggagcggcgcctgaaggacgacccgatgaccctggaggaccttagcaag
gtctacgatgtcagccgtgagcgcatccgccagatcgaggttcgggccttcgagaaactg
cagaaggcaatgacggccatggctcgcgaacaaggcatggcgctgagcgcctga
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