Amycolatopsis mediterranei U32: AMED_7499
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Entry
AMED_7499 CDS
T01269
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amd03021
]
AMED_7499 (rpoE)
Transcription machinery [BR:
amd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMED_7499 (rpoE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_28
HTH_38
HTH_17
GerE
HTH_24
HTH_AsnC-type
DUF6518
HTH_10
SdpA
Motif
Other DBs
NCBI-ProteinID:
ADJ49213
UniProt:
A0A0H3DGF4
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All DBs
Position
complement(8286144..8286755)
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AA seq
203 aa
AA seq
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MEGAGMAERGRLRLQPDEAQALAPSAEELLRRVAAGDETAFASLYDLVAGPVLGLATRVL
RSHAQAEEVAQEVLVEVWRKATRYEPERGSALSWVLTIAHRRAVDRVRSHQAGVDREERA
GLMDVRRPFDEVTESTLAGLEQQRVRQCLAALTELQRESIVLAYYNGYTYPEVAEVLKVA
PGTVKTRIRDGLIRLRDCLGVDR
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtgccggcatggctgagcgtgggcggttgcgactgcaaccggatgaggcgcag
gcgctcgcgccgagcgccgaagaactgctccggcgggtggcggcgggcgatgagacggcg
ttcgcgtcgctctacgacctcgtcgccggtccggtgctcggcctggcgacgcgcgtgctg
cgcagtcacgcgcaggccgaagaagtggcgcaggaggtgctggtggaggtgtggcgcaag
gcgacgaggtacgagccggagcgcggcagtgcgctgtcgtgggtgctgaccatcgcccac
cgccgggccgtcgaccgcgtgcgctcgcaccaggccggcgtcgaccgggaggagcgggcc
ggcctgatggacgtgcgacggccgttcgacgaggtgaccgagtccactttggccggtctg
gagcagcagcgggtgcggcagtgcctggccgcgctgaccgagctgcagcgcgagtcgatc
gtgctggcctactacaacggctacacctaccccgaggtcgccgaggtgctgaaggtcgcg
cccggcaccgtcaagacccgtatccgcgacggcctgatccggctgcgcgactgcctgggg
gtggaccgatga
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