Amycolatopsis mediterranei U32: AMED_8657
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Entry
AMED_8657 CDS
T01269
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amd
Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amd03021
]
AMED_8657 (rpoE)
Transcription machinery [BR:
amd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMED_8657 (rpoE)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
ADJ50352
UniProt:
A0A0H3DJH8
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All DBs
Position
complement(9495084..9495965)
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AA seq
293 aa
AA seq
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MNEELLARSFETHRDHLRSVAYRMLGSLTEAEDAVQESWLKLSRSDTAAVENLGGWLTTV
VGRVCLDMLRSRKARREEPWDALVPDPIVSREDAGPEHEALMADSVGLALLVVLDTLTPA
ERLAFVLRDMFAMPFEEIASVVGRSEAATRQLASRARRRVQGAPVAPDPDLARQREVVDA
FLAAARGGDFDALVSVLDPEVVLRADRGLARGGSTEVRGAAAVANQALTFSRLGAGGGVV
HRALVNGAAGVVATRAGRPFSVLGFTVAGGRIVEIDILADPDRLSRLDLAVLD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaggagctcctggcccgcagcttcgagacccaccgcgaccacctgcggtccgtc
gcctaccggatgctgggttcgctgaccgaggccgaggacgccgtccaggagtcgtggctg
aagctgagccggagcgacaccgcggccgtcgaaaacctgggcgggtggctgaccactgtc
gtcgggcgggtctgcctcgacatgctgcggtcgcgcaaggcccggcgcgaggagccgtgg
gacgcgctggtgcccgatccgatcgtcagccgcgaggacgccggccccgagcacgaggcg
ctgatggccgactcggtcggcctcgcgctgctggtcgtgctggacacgctcaccccggcc
gaacggctggcgttcgtgctgcgggacatgttcgcgatgccgttcgaggagatcgcctcg
gtcgtcggccgatccgaggcggcgacccggcagctggccagccgcgcgcggcggcgggtg
cagggcgccccggtcgcgccggaccccgatctcgcccgccagcgcgaagtcgtcgacgcc
ttcctcgccgctgcccgcggcggcgacttcgacgcgctcgtctcggtcctggaccccgaa
gtcgtgctgcgcgccgaccgcggcctggcgcggggcggctcgaccgaggtccgcggcgcg
gcggcggtggcgaaccaggccctgacgttctcgcggctcggcgccggcggcggcgtggtg
caccgggcgctggtcaacggcgcggcgggcgtggtcgcgacgcgcgcgggccggccgttc
tcggtgctgggcttcacggtcgcgggcggccggatcgtcgagatcgacatcctcgccgac
ccggaccgcctcagccggctggatctggccgtgctcgactga
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