KEGG   Alteromonas macleodii English Channel 673: AMEC673_05025
Entry
AMEC673_05025     CDS       T02254                                 
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
amg  Alteromonas macleodii English Channel 673
Pathway
amg02020  Two-component system
amg02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:amg00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AMEC673_05025 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    AMEC673_05025 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amg03021]
    AMEC673_05025 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:amg02035]
    AMEC673_05025 (fliA)
Transcription machinery [BR:amg03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AMEC673_05025 (fliA)
Bacterial motility proteins [BR:amg02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    AMEC673_05025 (fliA)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 UPF0122 HTH_10 HTH_23 GerE CT_C_D HTH_38
Other DBs
NCBI-ProteinID: AFT73702
LinkDB
Position
1180091..1180822
AA seq 243 aa
MNSKAAAYQQQTDKAQLVERHAPLVKRIAHHLIARLPASVLVDDLIQSGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHRNGRAITEAISQVESETGRDARDSD
IADKLNVSLQDYHQMLNEVNAGKLVGIEDLGVSEDVISTEQNRGSDAPLEDLMQGAFQKA
LAHAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKSRMKSWQA
DEE
NT seq 732 nt   +upstreamnt  +downstreamnt
ttgaacagcaaggcagccgcttatcaacaacaaaccgataaagcgcagttagtcgaaaga
catgcgccattggttaagcgtatagcgcatcacttgatagcgcgattgccggctagtgtt
cttgtagacgatttaattcaatcaggcatgattggattattagaagccgcgcgaaacttt
gatggttcaaaaggagccagctttgaaacgtttgccggtattcgcattcgcggtgctatg
ctagatgaaattcgcaaaggggattggacaccgcgttcagtccaccgaaatggtcgagcg
atcactgaagcaatttcgcaagtagaaagcgaaacaggccgcgatgctagagattctgat
attgctgataagcttaatgtaagcttgcaggactatcaccaaatgcttaatgaagtaaat
gccggaaagctggtaggtattgaagatttaggtgtgtcagaagatgttatttcgacagag
caaaatcgaggtagcgacgcaccactggaagatttgatgcaaggcgctttccaaaaagcg
cttgcccatgcaattacgacattacctgaaagagaagcgattgtactttcgctgtattat
gatgaagagctgaacctaagagaaattggtgaggttcttgatgtaagtgaatcgagagtc
agtcaaattcacagtcaggccatgttaaaactcaaatcacgaatgaagtcgtggcaagct
gacgaagaatag

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