Actinosynnema mirum: Amir_7047
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Entry
Amir_7047 CDS
T00957
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ami
Actinosynnema mirum
Pathway
ami03030
DNA replication
ami03430
Mismatch repair
ami03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ami00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Amir_7047
03430 Mismatch repair
Amir_7047
03440 Homologous recombination
Amir_7047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ami03032
]
Amir_7047
03400 DNA repair and recombination proteins [BR:
ami03400
]
Amir_7047
Enzymes [BR:
ami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Amir_7047
DNA replication proteins [BR:
ami03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Amir_7047
DNA repair and recombination proteins [BR:
ami03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Amir_7047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
ACU40839
UniProt:
C6WSG9
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All DBs
Position
8188123..8189271
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AA seq
382 aa
AA seq
DB search
MGYAVVDVETTGFRRSDRVVEVAVVQLDRDRRVTGEWCTLLNPGRDLGPQHVHRIRAADV
WGAPTFALAAGALARRLAGRVLVAHNLAFDARFLAAEFGRVGVDADFDGLCTMRLSGGRR
SLRDCCADAGVPLLDAHSALADAHAAAALFARLPEVPGAGALDLPPLGADVPEVRRGAAD
LAGGVLAGTAGAGPAGMAPAGTAPAGGVPASGLLAGAAPRSGALAGATRPVELSGGTLAG
GTRAGGTRSGEVLAGGALAGGSLGGPAIGVAATGVPGAGGPAAGGAGSAVRLARGDLVVF
TGQMDDARDVWVGRALGSGLRVNSGYVTRATALLVAADPFSLSTKARRARAYGVPIVSEG
AFAALLAGLADGLPDEPLGKIS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgggttacgcggtggtcgacgtggagacgaccgggttccggcggtccgaccgggtggtc
gaggtggccgtcgtgcagctggaccgggaccggcgggtcaccggggagtggtgcacgctg
ctgaaccccggccgggacctcggaccgcagcacgtgcaccggatcagggcagccgacgtg
tggggcgcgccgacgttcgcgctggcggcgggggcgctcgcccggcggttggcgggtcgg
gtgctggtggcgcacaacctggcgttcgacgcgcgcttcctggccgccgagttcggccgg
gtcggggtggacgcggacttcgacgggctgtgcacgatgcggctgtcgggcgggcggcgg
tcgctgcgggactgctgcgccgacgccggggtgccgctgctggacgcgcactcggcgctg
gccgacgcgcacgcggcggcggcgctgttcgcgcggctgcccgaggtccccggcgcgggc
gcgctggacctgccgccgctgggcgcggacgtgcccgaggtgcggcggggcgccgccgac
ctggcgggtggggtgctggcggggacggcgggcgccggaccggcgggaatggcgcctgcg
ggaacggcgccggcgggcggagttcccgcgagcgggctgctggcgggcgccgccccgcgg
tcgggcgcgctggccggtgcgacgcgaccggtcgagctgtccggcgggactctggccggt
gggactcgggccggtgggacgcggtcgggcgaagtcctggcaggcggggctctggcgggt
gggtcgctcggcggtccggcgattggtgttgcggcgaccggtgttccgggtgccggcggt
ccggcagccggcggcgcggggtcggcggtgcggttggcgcggggcgacctggtggtgttc
accgggcagatggacgacgcgcgcgacgtgtgggtgggccgggcgctgggctcggggctg
cgggtgaactccggttacgtcacgcgcgccacggcgctgctggtcgcggccgacccgttc
tccctgtcgaccaaggcgaggcgggcccgcgcgtacggggtgccgatcgtgtccgagggc
gcgttcgccgcgctgctcgccggtctcgcggacgggctccccgacgagccgctgggcaag
atcagctga
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