KEGG   Aminobacter sp. MSH1: CO731_03914
Entry
CO731_03914       CDS       T05420                                 
Symbol
ddpB
Name
(GenBank) putative D,D-dipeptide transport system permease protein DdpB
  KO
K02033  peptide/nickel transport system permease protein
Organism
amih  Aminobacter sp. MSH1
Pathway
amih02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:amih00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CO731_03914 (ddpB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:amih02000]
    CO731_03914 (ddpB)
Transporters [BR:amih02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    CO731_03914 (ddpB)
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N Oleosin
Other DBs
NCBI-ProteinID: AWC24427
UniProt: A0A2S0XN42
LinkDB
Position
complement(3961681..3962769)
AA seq 362 aa
MASEIDSAAQALPTGPGGSSRNARHAWKTLKGVLGVLVAVAFTFLGLLAITFFIGRVVPI
DPVLAVVGDRAPRAVYEAARIEMGLDKPLIVQFFHYVGNVLTGDLGMSVSTGKPVAEDLA
RVFPATLEMATLGIIIGVLLGVPMGVYAASRQGSLVDQVIRVVGLLGYSVPAFWLGLVGL
ALFYAKLQWVGGPGRLDIFYDGMVDPVTGLILIDSLIAGETDIFFNALSHIALPAAVLGF
FSLAYIARMTRSFMLDQLAQEYVTTARVKGVSERLVLWRHAFRPILVPLITVIGLSYAGL
LEGSVMIETVFSWPGIGNYLTTALLNADMNAVLGSTLVIGAVFIGINKISDVIYRVLDPR
AR
NT seq 1089 nt   +upstreamnt  +downstreamnt
gtggcatcagaaatcgactccgccgctcaggcgcttccaacagggcccggcggctcgtcg
cgcaatgcgcggcacgcctggaaaacgctgaagggcgtgcttggcgtcctcgtcgccgtc
gcattcaccttcctcggcctcctggccatcaccttcttcatcggccgcgtcgtgccgatc
gatccggtgctcgccgtcgtcggcgatagggccccgcgcgccgtctatgaggccgcgcgc
atcgagatgggcctcgacaagccgctgatcgtgcagttcttccactatgtcggcaatgtc
ctgaccggcgacctcggcatgtcggtgtcgacgggcaagcccgtggctgaggacctggcc
cgcgtcttcccggcgaccctcgagatggccacgctcggcatcatcatcggcgtgcttttg
ggcgtgccgatgggcgtctatgcggccagccgccagggcagcctcgtcgaccaggtcatc
cgagtcgtcggcctgctcggctattcggtgccggccttctggctcggcctcgtcggtctc
gcgctgttctatgccaagttgcaatgggtcggtggtcccggccggctcgacatcttctat
gacggcatggtcgacccggtgacgggcctgatcctcatcgacagcctgattgccggtgag
accgatatcttcttcaatgcgctctcgcacatcgcattgccggcagccgtgctcggcttc
ttcagcctggcatacatcgcccgcatgacgcgttccttcatgctcgaccagctggcgcag
gaatatgtcaccacagcccgcgtcaagggcgtgtcggagcggctggtgctgtggcgccat
gccttccgtccgatccttgtgccgctgatcaccgtcataggcctgtcctatgccggtctg
ctcgaagggtcggtgatgatcgagaccgtcttttcctggcccggcatcggcaattacctg
accacggcgctgctcaacgccgacatgaacgccgtgctcggctcgacgctggtcatcggc
gcggtcttcatcggcatcaacaagatttcggacgtgatctaccgcgtcctcgacccgagg
gcacgctga

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