Advenella mimigardefordensis: MIM_c23870
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Entry
MIM_c23870 CDS
T03016
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
amim
Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amim03021
]
MIM_c23870 (rpoE)
Transcription machinery [BR:
amim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MIM_c23870 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Phage_antitermQ
HTH_28
TnsD
HTH_29
HTH_20
Ebola_NP
Motif
Other DBs
NCBI-ProteinID:
AHG64461
UniProt:
W0PCJ0
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All DBs
Position
complement(2725715..2726314)
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AA seq
199 aa
AA seq
DB search
MNERDVDWELVQRVQKGDKKAFDLLVLKYQRKIMGLLARMVGSHSEVEDIAQETFIKAYR
AIAQFRGESAFYTWLYRIAINTARNWMSSSDRKMNYPDTLENKDGETFSHSDNLIDIATP
ESSMVTQEIVQTVNEAIETLPEDLRMAIVLRELEGLSYEEIAQAMACPVGTVRSRIFRAR
EAIAAKLKPVLGQGMDRRW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacgcgatgttgactgggagttggtgcagcgggttcagaagggtgataagaaa
gccttcgatctgctggttctgaaatatcagcgcaagatcatggggctgctggcccggatg
gtgggcagccacagcgaggttgaagatattgcgcaggaaacgtttattaaggcttaccgt
gcgattgcccagtttcgaggggaaagcgcgttttatacctggttgtatcgaatcgccatc
aatactgcacgcaactggatgtcatcttcagaccgcaagatgaattatccggatacgctg
gaaaacaaagatggtgaaactttttcccattcagacaatcttatagatattgccacgcct
gaatcgagcatggtaacgcaggaaatcgtccagactgtcaacgaagcgatcgaaacattg
cccgaagacttgcgcatggcaattgtgctaagagagctggaaggcctgagttacgaagaa
attgcacaggcaatggcctgcccggttggtacggtacgctcccgcatattccgtgcccgg
gaagccatcgcggcgaagctcaaacctgtcctggggcagggtatggatcgccgctggtaa
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