KEGG   Aminobacter sp. SS-2016: Amn_08990
Entry
Amn_08990         CDS       T09420                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
amis  Aminobacter sp. SS-2016
Brite
KEGG Orthology (KO) [BR:amis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amis03400]
    Amn_08990
Enzymes [BR:amis01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Amn_08990
    5.6.2.6  RNA 3'-5' helicase
     Amn_08990
DNA repair and recombination proteins [BR:amis03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Amn_08990
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII SepF
Other DBs
NCBI-ProteinID: BBD36019
LinkDB
Position
937478..940021
AA seq 847 aa
MTSQARLEPNSTAAMLPEPFLRWFAERGWSPRAHQLDLLTSAQQGNSVLLIAPTGAGKTL
AGFLPALTDLAIRPKRRPGEPQRGVHTLYISPLKALAVDIERNLGRPVDEMNLPITMETR
TGDTPQHKRTRQKLSPPDILLTTPEQLALLIASPDADRFFNGLRYIVLDELHSLVTSKRG
HLLSLGLARLRAYVPDLQAIGLSATVAEPDELRRWLVRQNPAGEMADLITVSGGARPEIT
ILDSEERVPWSGHSARYAIPEVYDAIRRHQTTLLFVNTRSQAELLFQELWRVNDDNLPIA
LHHGSLDVGQRRKVEKAMADNVLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRANHRMDEPSRAILVPANRFEVLECRAALEANYLGAQDTPPLIDGALDVLAQHVLGCAC
GAPFVADELYAEVTCAAPYAGLDRDSFDRVVDFVATGGYALRSYERYARIRKTKDGKWRV
SNPRIAQQYRLNVGTIIEAPMLNVRYTRAKGKVGAGTAAALTLRGGPVLGKIEEYFVETL
SVGDMFMFAGKVLRFEGIRENECYVSTGGAGNVLVPSYAGGKFPLSTYLADQVRGMLADP
ARWKALPEQVADWLRIQQEKSVLPRKEDLLIETFPRGERFYMVAYPFEGRLAHQTLGMLL
TRRLERMGARPLGFVATDYSLAVWALGDLGAMFRAKEPSLGELFDEDMLGDDLEAWLADS
WLLKRTFRNCAVIAGLIEKRFPGQEKSGRQVTVSADLIYDVLRSHEPDHLLLKATRADAA
SGLLDVRRLAEMLSRIRGRIVHKMLDQISPLAVPVMLEIGKEPVNGEAHDSLLLEAADLI
DEAMGSA
NT seq 2544 nt   +upstreamnt  +downstreamnt
gtgacgagccaagcgcgactggagccgaattcgactgccgcgatgctgccggagccattc
ctgcgatggttcgccgagcgcggctggtcgccgcgtgcccaccagctcgacctgctcacc
agtgcccagcagggcaattcggtgctgctgatcgcccccaccggtgccggcaagacgctg
gccggtttcctgcctgcgctgaccgatctggcgatccggccgaagaggcgtcccggcgag
ccgcaacgcggcgtgcatacactgtacatttcaccgctcaaggcgcttgccgtcgacatc
gaacgcaatctcggcaggcctgttgacgagatgaacctgccgatcacgatggagacgcgc
accggcgacacgccgcagcacaagcgcacgcgccagaagctgtcaccgccggacatattg
ctgacgacacccgagcaactggcgttgctgatcgcatcgcccgacgcagaccgcttcttc
aacgggctgcgctacatcgtgctcgacgaactgcattcgctggtcacctccaagcgcggg
cacctcttgtcgctcgggctggcgcggctcagggcctacgtgcccgacctgcaggcgatc
gggctgtcggcgacggtggccgagccggacgagctccggcgctggctggtcaggcagaat
ccggcaggcgagatggccgacctcatcaccgtgtcgggcggtgccaggccagagatcacg
atcctcgattccgaggagcgtgtgccgtggtcggggcattcggcgcgatatgccattccc
gaagtctatgacgcgatccgccggcaccagacgacgcttttgttcgtcaacacccggagc
caggccgagctgttgttccaggagctgtggcgcgtcaacgacgacaatctgccgatcgcc
ctgcatcacggctcgctcgacgtcggccagcgccgcaaggtcgagaaggcgatggccgac
aacgtgttgcgtgccgtcgtcgcaacctcgacgctcgatctcggcatcgactggggcgac
gtcgatctcgtcgtccatgttggcgcccccaagggcgcgagccggctcgcccagcgcatc
ggccgcgccaaccaccggatggacgagccgagccgggcgatcctggtgccggccaatcgt
ttcgaggtgctggagtgccgggccgcactcgaggccaattatctcggcgcgcaggacacc
ccgccgctgatcgacggcgcgctcgacgtgctggcccagcatgtgctgggctgcgcctgt
ggcgcgcccttcgtcgcagacgagctttacgccgaagtaacatgtgctgctccctatgcc
gggctagaccgcgacagtttcgaccgcgtcgtcgatttcgtcgccaccggcggctacgcg
ctgcgcagctacgagcgctacgcccgcatccgcaagaccaaggatggtaagtggcgggtg
tccaatccgcgcattgcccagcaatacaggctgaatgtcggcaccatcatcgaagcgccg
atgctgaacgtccgttacaccagggccaagggcaaggtcggcgcgggcacggcagcagca
ctgaccctgcgcggcgggccggtgctcggcaagatcgaggagtatttcgtcgagacactt
tcggtgggcgacatgttcatgttcgccggcaaggtgctgcgcttcgagggcatccgcgaa
aatgagtgttatgtctcgacgggcggcgccggcaacgttctggtgccgtcttatgccggc
ggcaagtttccgctgtcgacctatctcgccgaccaggtgcgcggcatgctggccgacccc
gcgcgctggaaggcgctgcctgagcaggtcgcagactggctgcgcatccagcaggagaag
tcggtgctgccgcgcaaggaggaccttctgatcgagacttttccacgcggcgagcgcttc
tacatggtggcctatcccttcgaggggcggctggcgcaccagacgctcggtatgcttctg
acccgccggctggagcgcatgggcgcgcggccgctgggctttgtcgccaccgactattcg
ctggccgtctgggcgctgggcgatctgggggcgatgttcagggcgaaagaaccgtcgctg
ggcgaactgttcgacgaggatatgctgggcgacgacctcgaggcctggttggccgacagc
tggctgctcaagcgcaccttccgcaactgtgccgtcatcgccgggctgatcgagaagcgg
tttcccggccaggaaaagagcggccgacaggtgactgtttcagccgacctcatttacgac
gtcttgcgcagccatgagcccgaccaccttctgctcaaggcgacgcgggcggatgcagcc
agcgggctgctcgatgtcaggaggcttgccgagatgctctcgcgcatccgcggccgaatc
gtgcacaagatgctcgaccagatttcgccgctggcggtgccagtgatgcttgagatcggc
aaggagccggtcaatggcgaggcgcacgactccctgcttctggaggcggcggatctgatc
gatgaggcgatgggaagcgcatga

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