Alligator mississippiensis (American alligator): 102559323
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Entry
102559323 CDS
T03087
Symbol
CACNB1
Name
(RefSeq) calcium voltage-gated channel auxiliary subunit beta 1
KO
K04862
voltage-dependent calcium channel beta-1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04010
MAPK signaling pathway
amj04260
Cardiac muscle contraction
amj04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102559323 (CACNB1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102559323 (CACNB1)
04261 Adrenergic signaling in cardiomyocytes
102559323 (CACNB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102559323 (CACNB1)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102559323 (CACNB1)
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Ortholog
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
102559323
NCBI-ProteinID:
XP_006275044
UniProt:
A0A151P6C5
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All DBs
Position
Un
AA seq
646 aa
AA seq
DB search
MVQDGSMSRTPCSSSQDIQMDVFDHPGLQGKYGKRKSRFKRSDGSTSSDTTSNSFVRQGS
AESYTSRPSDSDVSLEEDREALHKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPNDDM
PVQGMAISFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENMRMLQEQKMRQN
RLSSSKSGDNSSSSLGDVVTGTRRPTPPASGTLDMTNLAYDPDALDLEDEEAEGLENHRS
PKTSVSSVTTPPSNVKRIPFFKKAEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALF
DFLKHRFDGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLAEVQSEIERIFELA
RTLQLVALDADTINHPAQLAKTSLAPIIVYIKITSPKVLQRLVKSRGKSQAKHLNVQMVA
SDKLAQCPPEMFDIILDENQLEDACEHLSEYLEAYWKATHPPSSNPPNPLLNRTMATAAL
AASPAPVSNLQGPYLVHGEQTREGERASLHDYPGEPATRSQGRPGQLHARLVNRGLSRQD
TFDSETQGSRDSAYTEPGDSCMDMETDPYEEPEAEPRSTPGAYHRGLGRHHLHLHQSSWD
EDEPDRENHNRQPRGKGRDHYCQNEEEAMGMNKNDMEAWGRDVYIR
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggacggcagcatgtccaggacgccgtgcagctccagccaggacatccagatg
gacgtgttcgaccacccgggcctgcaggggaaatacggcaagcggaagagtcgtttcaaa
cgctcggatggcagcacctcctcggacacaacttccaacagcttcgtgagacagggctct
gcggagtcctacaccagccgtccctcagactcggatgtgtccctggaggaggatcgtgaa
gctttgcacaaggaggctgagcgccaggccctggcacaactggagaaggccaagaccaag
ccagtagcatttgcagtgaggacaaatgtaggctacaacccatcccctaatgatgacatg
ccagtccagggtatggccatctcctttgaacccaaagacttcctgcatatcaaagagaaa
tataacaacgactggtggatcgggcgcctggtgaaggagggctgtgaggtgggcttcatc
cccagccctgtcaaactggaaaacatgaggatgctgcaggagcaaaagatgaggcaaaac
cgcctcagttcaagcaaatcaggggacaactccagctccagcctgggagatgtggtgacg
gggacccgcagacccaccccacctgccagcggtactctggacatgactaacttagcttat
gaccctgatgcccttgacttagaagatgaggaggccgaaggcctggagaaccaccgctcc
cctaagactagcgttagcagtgtcaccacacccccctccaacgtcaagcgcatccccttc
tttaagaaggcggagcacgtgcctccctatgatgtggtaccctccatgcggccaatcata
cttgtggggccgtctttgaaggggtacgaggtgacagacatgatgcagaaagctcttttt
gacttcctgaagcatcgctttgatggcaggatctccatcacgcgggtgacagccgacatc
tccctggccaagcgctctgtgctgaataaccccagcaaacacaccatcatcgaacgctcc
agcacgcgctccagcctggctgaggtgcagagtgagattgagcgcattttcgaactggcc
cggaccctgcagcttgtggctcttgatgcggacaccatcaaccacccagcccagctagcc
aagacctcactggcccccatcattgtgtacatcaagatcacctcccctaaggtgctccag
agactggtcaagtcccggggaaagtcccaggccaaacacctgaatgtgcagatggtggca
tcagacaaactggcacagtgccctccggaaatgtttgacatcatcctggatgagaaccaa
ttggaagatgcctgtgagcacctgtctgagtacctggaagcctattggaaggccacgcat
ccacccagcagcaacccacccaatcccctcctgaaccgcaccatggctactgctgcccta
gctgccagtcccgcccctgtctccaacctccagggcccctacctagtgcatggggagcag
acgcgtgagggggagcgtgctagccttcatgactacccaggagagccggccacccgcagc
caggggcgtccaggccagctccatgctcgcctagtcaaccgtggcctatcacgccaggac
accttcgactcagagacccagggcagccgtgactcggcctacacagagccgggcgattcc
tgcatggacatggagacggacccctatgaggagcccgaagctgagccacgcagcacccct
ggtgcctaccaccgagggctgggccgccaccacctccacctgcaccagagctcctgggat
gaggatgagccagatcgggagaaccacaaccggcaacctcggggcaaggggcgagaccac
tactgccagaacgaggaggaggccatgggcatgaacaagaatgacatggaggcctggggg
cgggacgtgtacatccgctag
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