Alligator mississippiensis (American alligator): 102560946
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Entry
102560946 CDS
T03087
Symbol
RARA
Name
(RefSeq) retinoic acid receptor alpha
KO
K08527
retinoic acid receptor alpha
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102560946 (RARA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amj03310
]
102560946 (RARA)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
102560946 (RARA)
Nuclear receptors [BR:
amj03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
102560946 (RARA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
102560946
NCBI-ProteinID:
XP_006270842
UniProt:
A0A151PCR3
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All DBs
Position
Un
AA seq
460 aa
AA seq
DB search
MASNSSSCPTPGGGHLNGYPMPHYAFFFPHMIGGLSPPGALAGIQHQLPVSGYSTPSPAT
IETQSTSSEEIVPSPPSPPPLPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
VYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKDTPKPESSESYVV
TPEVENLIEKVRKAHQDTFPALCQLGKYTTNNSSDQRVSLDIDLWDKFSELSTKCIIKTV
EFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDKLQEPLLEALK
VYVRKRRPSKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGM
DTLGGQPSASRMGSLAPPPGSCSPSLSPSSNRSSPATHSP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaacagcagctcctgtcccacccctgggggcgggcacctcaatgggtaccct
atgccccactacgccttcttcttcccgcacatgattggtgggctctcaccgccaggcgcg
ctggcaggcatccagcaccagctccctgtgagtggatacagcaccccctcgccagccacc
atagagacgcagagcaccagctctgaagagatcgtccccagccccccatctccgcccccg
ctgcctcgggtctacaagccctgcttcgtgtgccaggacaagtcctcgggctaccactat
ggggtgagcgcctgcgaaggctgcaagggcttcttccgccggagcatccagaagaacatg
gtgtacacatgccaccgggacaagaactgtatcatcaacaaggtgacacgcaaccgctgc
cagtactgccgcctccagaagtgcttcgaagtgggcatgtccaaggagtctgtccggaat
gacaggaacaagaagaagaaggacacgcctaagccggagagttcggagagctatgtggtc
acgcccgaggtggagaacctcattgagaaggtgcgcaaggcccaccaggataccttcccc
gccctgtgccagctgggcaaatacactacgaataacagctcggatcagcgggtctcactg
gacatcgacttgtgggacaaattcagtgagctgtccaccaagtgcatcatcaagacagtg
gagttcgccaagcagctccccggcttcaccacgctcaccattgccgaccaaatcaccctc
ctcaaagctgcctgcctagacatcctgatcctgcggatctgcacgcgctacacgccggag
caggacaccatgaccttctcggatgggctgaccctgaaccgcacccagatgcacaacgct
ggcttcgggcccctcaccgacctggtcttcgcctttgccaaccagctgctcccgctggag
atggatgatgctgagacggggctgctcagtgccatctgcctcatctgtggagatcgtcag
gacctggagcagccggacagggtggacaagctgcaggagccgctgctggaggcgctcaag
gtttacgtgaggaagaggcggcccagcaagccccacatgttccccaagatgctgatgaag
atcacagacctgcgcagcattagcgccaagggtgcggagcgggtgatcacactgaagatg
gagatccctggctccatgccgcccctcatccaggagatgctggaaaactcggagggcatg
gacacactgggtgggcagccaagtgcttcccgcatgggcagcctggccccaccccctggc
agctgcagccccagcctgtcgcccagttccaacagaagcagcccggccacccactcgccc
tga
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