Alligator mississippiensis (American alligator): 102562451
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Entry
102562451 CDS
T03087
Symbol
TPM1
Name
(RefSeq) tropomyosin 1 (alpha)
KO
K10373
tropomyosin 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04260
Cardiac muscle contraction
amj04261
Adrenergic signaling in cardiomyocytes
amj04814
Motor proteins
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102562451 (TPM1)
04820 Cytoskeleton in muscle cells
102562451 (TPM1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102562451 (TPM1)
04261 Adrenergic signaling in cardiomyocytes
102562451 (TPM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102562451 (TPM1)
04147 Exosome [BR:
amj04147
]
102562451 (TPM1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
102562451 (TPM1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of microglial cells
102562451 (TPM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
CLZ
Laminin_II
Crescentin
DUF745
ATG16
TMF_DNA_bd
DUF3450
CENP-F_leu_zip
ERM_helical
Laminin_I
Lebercilin
GAS
DUF16
DUF1664
MAD
Fez1
DUF4200
Motif
Other DBs
NCBI-GeneID:
102562451
NCBI-ProteinID:
XP_006277347
LinkDB
All DBs
Position
Un
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAESEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAQKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERAE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgctgaagctcgacaaggagaacgccttggac
cgggccgagcaggcggaggcggacaagaaggcggcggaggaccgaagcaagcagctggag
gatgagctggtggctctgcaaaagaagctgaaaggcactgaggatgagttggacaaatac
tccgagtcccttaaagatgcccaggaaaagctggaactggctgagaaaaaggctaccgat
gctgagagcgaggtagcttctctgaacagacgtatccagctggttgaggaagagttggat
cgtgcacaggagcgtttggcaactgctctgcaaaagctggaggaggctgagaaggcagca
gatgagagtgaaagaggaatgaaagtcattgaaaacagagcccaaaaggatgaagagaaa
atggaaatccaagagatccagcttaaagaagccaagcatatcgctgaggaggctgaccgc
aaatacgaagaggtggcgcgtaaattggtaattattgagagtgatcttgagagggctgag
gaacgcgctgaactttcggaaggcaaatgtgctgagcttgaagaggagttgaaaactgtg
accaacaacctgaagtcgctggaggctcaggctgagaagtactcacagaaggaagacaaa
tatgaagaggagattaaaatcctgactgacaaactgaaggaggccgagactcgtgctgaa
tttgctgagagatcagtaaccaagctggagaagagcattgatgacctagaagatgagtta
tatgctcagaaactgaagtacaaagcgatcagtgaggagctggaccacgctctcaatgat
atgacttccatgtaa
DBGET
integrated database retrieval system
