Alligator mississippiensis (American alligator): 102565705
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Entry
102565705 CDS
T03087
Symbol
EBF1
Name
(RefSeq) early B-cell factor 1
KO
K09103
early B-cell factor
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102565705 (EBF1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102565705 (EBF1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
102565705
NCBI-ProteinID:
XP_014465617
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All DBs
Position
Un
AA seq
603 aa
AA seq
DB search
MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQ
LPALANTSVHAGMMGVNSFSGQLAVNVSEASQATSQGFTRNSSSVSPHGYVPSTTPQQTN
YNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGI
FSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQDQSFVDSSKYSNAGSLQGL
AFS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcatccaggaaagcatccagcggagcgggagcagcatgaaggaggaaccgctc
ggctccggcatgaacgcggtgcggacctggatgcagggcgccggcgtgctggacgccaac
acggcggcgcagagcggcgtggggctggcccgggcgcacttcgagaagcagccgccctcc
aacctgcgcaagtccaacttcttccacttcgtgctggcgctgtacgacaggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaagaggccaac
agcgagaagaccaacaacgggatccactaccgcctgcagctgctctacagcaacgggatc
cgcaccgagcaggatttctacgtgcgcttgatcgactccatgaccaaacaagcaatagta
tatgaaggccaagacaagaacccagaaatgtgcagagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccagaattgcctaaaa
aatgcaggaaaccctcgggacatgcggagatttcaggtcgtggtgtctacaacagtcaac
gttgacggccatgtgttggcagtgtcggacaacatgtttgtacacaacaactccaagcac
gggcgccgggctagaaggcttgatccctcggaaggtacgccttcttatctggaacatgct
acaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccactgtc
atcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctggtt
tggagtgagctgattactcctcatgcaatccgagttcagacgcctccccgacacatccct
ggtgtggtagaagtcacattgtcctacaaatcgaagcagttctgcaagggaacgcctggg
aggttcatttacaccgctctgaacgaacccaccattgactacggcttccagaggttacag
aaggttattccacgacaccccggtgatcccgagcgcttgccaaaggaagtaatattgaag
agagcggctgatttggtagaagctctctatggtatgccacataataaccaggaaataatc
ctgaaaagagcagcagatattgcagaagcactgtacagtgttccccgcaatcacaaccag
ctcccagcacttgctaacacgtccgtccatgcagggatgatgggagtgaattccttcagt
ggtcagctagccgtcaacgtctccgaagcctcgcaggccaccagtcagggttttactcgc
aactcgagcagcgtgtcaccgcacgggtacgtgccaagcaccacccctcagcagacaaac
tacaactcggtcaccacgagcatgaatggctacgggaatgccggaatgtcaaatttaggc
ggttctccaaccttcctgaatgggtctgctgccaactctccctacgccattgtgccgtcc
agtccaaccatggcttcctccactagcctcccctccaactgtagcagttcctctgggatc
ttctccttctcaccagccaacatggtctcagcggtgaaacagaagagcgctttcgcccct
gtcgtgagaccacaaacttcccctcctcccacctgcaccagcaccaatgggaatagcctg
caagaccagtcttttgtggactctagcaagtactccaatgcagggtctctccaggggctg
gccttctcctga
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integrated database retrieval system
