Alligator mississippiensis (American alligator): 102566601
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Entry
102566601 CDS
T03087
Symbol
PCDH10, PCDHGC5
Name
(RefSeq) protocadherin 10
KO
K16499
protocadherin delta 2
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
amj04515
]
102566601 (PCDH10)
Cell adhesion molecules [BR:
amj04515
]
Cadherins
Protocadherins
102566601 (PCDH10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
102566601
NCBI-ProteinID:
XP_019349891
LinkDB
All DBs
Position
Un
AA seq
1091 aa
AA seq
DB search
MVLLSLVAWLWLAEGARAQLRYTVQEEQEHGTFVGNIAEDLGLDVTKLSARRFQAAPNSR
SPYLALDLETGVLSVSEKMDREQICKQSPACLLHLEVFLENPLELFRVEVEVLDINDNPP
AFPEPDLTVEISESATPGTRLPLESAFDPDVGTNALRTYELTPNAYFSLDVQTQPGDGSR
FAELVLQQALDREQQALHRYVLTAVDGGQPQARTGTALLSVRVLDSNDNVPAFEQAVYAV
ALAENSPPGTLVLQLNASDPDEGANGEVLYSFSSHISARAREVFGLAPRTGRLEVAGELD
YEESSAYQVYVQAKDLGPNAVPAHCKVLVRLLDANDNAPEISFSTVKEAVSEAAAPGTVV
ALFSVSDRDSAENGEVRCELVQAGAAPFRLKSSFKNYYTIVTEGALDREQPGGDAYTLTV
VARDGGRPPLSATHSIQVRVSDVNDNAPRFSQSRYRVQVSENNVPGAYIFAVSATDRDAG
ANARLAYAILDGQIQGMSVFTYVSINAENGFLYALRSFDYEQLKEFSFQVQARDAGEEPQ
ALAANATVHVAVLDQNDNAPAVVSPLPGRNGTPARELLPRGAEPGYLVSRVAAVDADDGD
NARLTYSLARGNEAGLFRLDWRSGELRTARRVPAKRDAQRPYDLLVEVRDHGQPPLSSTA
AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGAESSLDLTLILIIALGSVSFVFLLA
MIVLAVRCQKEKKLSIYTCLAGDCCCGCCGACCPAACCCCGRQARARKKKLSKSDIMLVQ
SAAAAAAAAAAASSPGSAAQGPADDAPGFGSHHHSQNYCYQVCLTPESAKTDLMFLKPCS
PARSADAEHSPCGAIVTAYADQQPDIISNGSILSSETKHQRAELSYLVDRPRRVNSSAFQ
EADIVSSKDSGHGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRCWMPSFVPS
DGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHNTLERKELDGL
LSNTRAPYKPPYLIFNGESIREIPACRPAFFSAFHLWISKWIIKRIVIYALLHLCCDSTE
KDMLVNSTGLT
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgctgtccctcgtcgcctggctgtggctagcggagggcgcccgggcgcagctc
cgctacacggtgcaggaggagcaggagcatggcacgttcgtggggaatatcgcggaggac
ctgggcttggacgttacaaaactttcggcgcggcgcttccaggcggcgcccaactcgcgg
agcccctacctggcgctggacctggagacgggcgtgctgtccgtgagcgagaagatggac
cgggagcagatctgcaagcagagcccggcctgcctcctgcacctcgaggtcttcctggag
aacccgctggagctgttccgcgtggaggtggaggtgctggacatcaacgacaacccgccc
gccttccccgagccggacctgacggtggagatctcggagagcgccacgccgggcacgcgg
ctgccgctggagagcgccttcgacccggacgtgggcaccaacgcgctgcgcacctacgag
ctcacccccaacgcctacttctcgctggacgtgcagacgcagccgggcgacgggagccgc
ttcgcggagctggtgctgcagcaggcgctggaccgcgagcagcaggcgctgcaccgctac
gtgctcacggcggtggacggcgggcagccgcaggcgcggacgggcacggcgctgctgagc
gtgcgggtgctggactccaacgacaacgtgcccgccttcgagcaggccgtgtacgccgtg
gcgctggccgagaactcgccgcccggcacgctggtgctgcagctcaacgccagcgacccc
gacgagggcgccaacggggaggtgctctactccttcagcagccacatctcggcccgcgcg
cgggaggtcttcggcctggcgccgcgcacgggccgcctggaggtggcgggcgagctggac
tacgaggagagcagcgcctaccaggtgtacgtgcaggccaaggacctgggccccaacgcc
gtgccggcgcactgcaaggtgctggtgcgcctgctggacgccaacgacaacgcgcccgag
atcagcttctccaccgtgaaggaggcggtgagcgaggcggcggcgccgggcaccgtggtg
gcgctcttcagcgtctcagaccgcgactcggcggagaacggcgaggtgcgctgcgagctg
gtgcaggcgggcgccgcgcccttccgcctcaagagctccttcaagaactactacaccatc
gtgaccgagggcgcgctggaccgcgagcagcccggcggcgacgcttacacgctgaccgtg
gtggcccgcgacggcggccgcccgccgctcagcgccacgcacagcatccaggtgcgggtg
agcgacgtgaacgacaacgcgccgcgcttctcgcagtcccgctaccgcgtgcaggtgagc
gagaacaacgtgcccggcgcctacatcttcgccgtcagcgccacggaccgcgacgccggc
gccaacgcccgcctggcctacgccatcctggacgggcagatccagggcatgtccgtcttc
acctacgtgtccatcaacgccgagaacggcttcctctacgccctgcgctccttcgactac
gagcagctcaaggagttcagcttccaggtgcaggcccgcgacgccggcgaggagccgcag
gcgctggccgccaacgccacggtgcacgtggccgtgctcgaccagaacgacaacgcgccg
gccgtggtcagccccctgcccggccgcaatgggacgccggcccgcgagctgctgccccgc
ggcgccgagccgggctacctggtcagccgcgtggccgccgtggacgccgacgacggggac
aacgcgcgcctcacctacagcctggcgcggggcaacgaggccggcctcttccgcctcgac
tggcgcagcggcgagctccgcacggcccgccgcgtgcccgccaagcgcgacgcgcagcgc
ccctacgacctgctggtggaggtgcgcgaccacgggcagccgccgctctcctccaccgcc
gcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngccgcgcgggcgccgagagctcgctc
gacctcacgctcatcctcattatcgcgctgggctccgtgtccttcgtcttcctgctggcc
atgatcgtgctggccgtgcgctgccagaaggagaagaagctcagcatctacacctgcctg
gccggcgactgctgctgcggctgctgcggcgcctgctgccccgccgcctgttgctgctgc
ggccgccaggcgcgggcccgcaagaagaagctcagtaagtcggacatcatgctggtgcag
agcgcggccgccgccgctgcggccgccgccgccgcctcctcgcccggcagcgccgcgcag
ggccccgccgacgacgcgcccggcttcggctcccaccaccacagccagaactactgctac
caggtctgcctcacgcccgagtccgccaagaccgacctcatgttcctcaagccctgcagc
ccggcccgcagcgccgacgccgagcacagcccgtgcggggccatcgtcaccgcctacgcc
gaccagcagcccgacatcatctccaacggcagcatcctgtccagcgagacaaaacatcag
cgtgcagagctcagttatctagttgatagaccccgacgggtaaacagttctgcattccag
gaagcagacatagtaagctctaaagacagtggtcacggagacagtgagcaaggcgacagt
gatcatgatgccactaatcgaggtcaatcctctggcatggatctcttttccaactgcaca
gaggaatgtaaagcactgggtcactcagatcgatgctggatgccttcctttgttccatcc
gatggacgccaagctgcagattaccgcagcaatctgcatgtacctggtatggactctgtt
ccagacactgaagtgtttgaaacaccagaagcccagcctggggcagaaagatccttctcc
acctttggcaaagagaaggcccttcacaatactctggagaggaaggagttggatggactg
ctgtctaatacacgagcgccttacaaaccaccatatttgatctttaatggagagagcatt
agggagatacctgcttgcagaccagcttttttcagtgctttccatctgtggatctcaaag
tggattataaagagaatagtgatttatgccttgctgcacctctgttgtgatagcacggaa
aaggatatgctagtcaattctacaggacttacctga
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