Alligator mississippiensis (American alligator): 102569824
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Entry
102569824 CDS
T03087
Symbol
FN1
Name
(RefSeq) fibronectin 1
KO
K05717
fibronectin 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04510
Focal adhesion
amj04512
ECM-receptor interaction
amj04810
Regulation of actin cytoskeleton
amj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102569824 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102569824 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102569824 (FN1)
04810 Regulation of actin cytoskeleton
102569824 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102569824 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102569824 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
amj00536
]
102569824 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
amj04990
]
102569824 (FN1)
Membrane trafficking [BR:
amj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
102569824 (FN1)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
102569824 (FN1)
Glycosaminoglycan binding proteins [BR:
amj00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102569824 (FN1)
Domain-containing proteins not elsewhere classified [BR:
amj04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
102569824 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
fn2
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
102569824
NCBI-ProteinID:
XP_006276492
LinkDB
All DBs
Position
Un
AA seq
2384 aa
AA seq
DB search
MPSSPAGQRLLLLLLFALCLGARCTERTAAKSRRQAQQVVQPPVPGTQSKQGCFDNGRHY
QINQQWERIYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPVAERCYDNNAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTKTS
YRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHTSLHTTSTGSGSSSFTDVRTALYQPQ
PQPQPYGQCITDNGVVYSVGMQWLKSQGSQQMLCTCLGNGVSCKEIAVTQTYGGNSNGEP
CVLPFTFDGRTFYSCTTEGRTDGQLWCSTTSDFVQDRKYSFCTEQNGLVQTRGGNSNGAL
CYFPFLYNNRNYTDCTSEGRRDNMKWCGTTPNYDADQKFGFCPMAAHEEACTTNEGVMYR
VGDQWDKQHDMGHMMRCTCMGNGRGEWTCIPYSQLRDQCIVDDITYDVNQTFHKRHEEGH
MLNCTCFGQGRGRWKCDPIDQCQDSETQTFYQIGDAWEKFLHNVRYQCYCYGLGIGEWHC
QPLQTYPGSTGPVQVIITESPNHPNSHPIQWNAPESSHISKYILRWKPKNSRVHWKEATI
PGHLNSYTISGLKPGVIYEGQLVSVQQYGLRELTRFDFTTAVISNTVVGETTPLTPMVAT
SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGR
KYIVNVYQISEEGEQNLILSTSQTTAPDAPPEHTVESVDDTSIVVSWSRPQAPITGYRII
YAPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQQETTGVPRA
DDIPSPRDLQFVEVSDVKITIMWTPPESTVSGYRVEVIPVHHPGEHGQRLPITRSSFAEV
IDLLPGTTYVFKIFAVSHGRESKPLTGEQTTKLDAPTNLRFINTTESSVLVTWTPPHAPI
SGYRLTIGPTRGGQPRNYNVGPSVIKYLLKSLQPGTEYTVYLVAVKGNQQSTRETGVFTT
LQPVGSIPLYHTEVTETSIVVTWTPAPRIGFKLGVRPSQGGEAPREVISESGSIVISGLT
PGVEYIYSISVLMDGEERENPIIKSVVTPLSPPATLHLEPNPDTGVLTVSWDRSTTPGIS
GYRITTAPTSGQQGYTLEEVVSAEQTYCTFENLSPGVEYNVSVYSVKGNQESIPISKTIT
QAVPAPTDLSFTSVGPDAMRVAWIPPTSIVLSSFLVRYSPVKNEEDVAELTISPTDRSVY
LQNLLPGTEYLVKVYSISEHHESVPLTGVQKTGIDSPMGIDFSDITANTFTVHWIAPRAT
ITGYRVRHQLEHGGGRPKEDRIPPSRNSITLTNLVPGSEYVVSIIAFNGREDSLPLVGQQ
STVSDVPQDLEVTPTSPTSLRISWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTVSDAN
ISGLKPGVDYTITVYAVTGRGDSPASSKPVTVTYKIEINTPSQMQVTDVQDNSISVRWVP
SSSPVTGYRVTTVPKDGHGPTKTKTVPADQTEVTVEGLQPTVEYVISVYAQNQNGESEPL
SETTVTNIDRPKGLTFTEVDVDSIKIAWESPQGQVTSYRVTYSSPEDGIHELLPAPDGED
DTAELHGLRPGSEYTVSIVALHDDKESQPLTGTQSTAIPPPTNLNFVQVTPTSLMVTWNA
PNVRLTGYRVRVNPKEKTGPMKEINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPA
QGVITTLENVSPPRRARVGDVTETTISINWRTKTETITGFQVDAIPASGQNPIRRTIRPD
LRMYTITGLQPGTDYKIHLYALNDNARSSPVVIDASTNVDAPSNLQFLTTTSNSLLVTWQ
PPRAKITGYIIKYNKPGAQPKELLPRPRPGTTEATIIGLEPGTEYTIYIIAVKNNQKSEP
LIGRKKTDELPTLVTQTHPNQPEILDVPSIDERPPYFTNNRYDNGNGIQLPGTTGQQPSI
GHQGQQVFFEEHGFRRTTPPTTATPSRHRPRPQPPNVDETVELARYPIPHVVEPSYPHSR
GPRRNDTTGQEALSRTTISWRPLLESTEYLISCLPVGNDEETLQFRVPGTASSATLTGLT
RGATYNIIVEALKDHRRQKVLEEVVTVDNTVSEGLNQPTDDSCYDTYTGSFYSIGEEWER
LSETGFKLWCQCLGFGSGHFRCDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGK
GEFKCEPHEATCYDDGKMYHVGEQWQKEYLGAICSCTCYGGQQGWRCDNCRRPNVDAASE
GSSGHTYTRFTQRYHQSTNTNVNCPIECFMPLDVQADTQHPRGQ
NT seq
7155 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcagccccgcggggcagcggctgctgctgctgctgctcttcgccctgtgccta
ggggcgcgctgcacggagcgcacggcggccaaaagcaggaggcaagcccagcaagttgtc
cagcccccggtgcccggcacgcagagcaaacagggctgttttgacaatggccgacactat
caaataaaccagcaatgggaacgcatttacctgggaaacacactggtctgtacctgctat
gggggatccagaggctttaactgtgaaagcaagcctgaacctgaagaaacttgctttgac
aaatacactggatctacttaccgagtaggggagacttatgagcgccccaaggattccatg
atctgggactgtacttgcattggagctggacgtggaagaatcagctgcactatcgcaaat
cggtgccacgaaggaggtcagtcctacaagattggtgatacgtggcgcagacctcatgag
acaggtggctatatgctagagtgcgtgtgtctaggaaatgggaaaggtgaatggacctgc
aaacctgtagctgagagatgctatgacaacaatgctggaacctcttatgttgttggagag
acttgggagaagccttatcagggctggatgatggtggactgcacctgcttaggtgaaggc
agtggacgtattacctgtacctccagaaatcggtgcaatgatcatgacaccaagacttcc
tacagaattggagatacgtggagtaagaaggataaccgaggaaatctgcttcagtgcatc
tgcactggtaatggcagaggcgagtggaagtgtgaaagacacacatcccttcatactact
agcacaggatctgggtcttctagctttacagatgtacgaactgcactttaccagcctcaa
ccccagccccagccatatggccagtgtataactgataatggagtggtgtactcagttggc
atgcagtggctcaaatcacagggcagccagcagatgctttgtacttgtctgggcaatgga
gtcagctgcaaggagatagctgtgacacaaacctatggtggcaattccaatggagaacca
tgtgttttgccattcacctttgatgggagaaccttctattcttgcacaactgaaggccga
acggatggccagctgtggtgcagcacaacctcagatttcgtgcaggaccggaaatactcc
ttctgcacagaacaaaacggtttggtccagacacgtggcggcaattcaaatggtgctttg
tgctacttccccttcctgtataacaaccgcaactacactgattgtacttctgagggacgg
agagacaacatgaagtggtgtggaaccacccctaactatgatgctgaccagaagtttggc
ttctgccctatggctgcccatgaagaagcctgtacaaccaatgaaggtgtcatgtaccgt
gtgggtgaccagtgggacaaacagcatgatatgggccatatgatgagatgcacttgtatg
ggaaatggccgtggtgaatggacgtgcattccatactcccagctcagagaccagtgtatt
gttgatgacatcacctatgatgttaaccagacatttcacaagcgtcacgaagaagggcat
atgctgaactgcacgtgctttggccagggtcgtgggagatggaagtgtgatcctattgat
cagtgccaggattcagaaacccagaccttctatcaaattggggatgcatgggagaagttc
cttcacaatgttagataccagtgctattgctatggccttggtattggagagtggcattgc
cagcctttgcagacctatccaggttcaactggtccagtccaggtgatcatcacagagagt
cccaatcatcccaactcccatcccatccagtggaatgcacccgaatcttctcacatttct
aagtacattctccgctggaaaccgaaaaactccagagtacattggaaggaagccaccatc
cctggtcacttgaactcctacaccatctcaggcctgaaacctggtgtaatatatgaagga
cagcttgtcagtgtgcaacagtatggactcagagaactcacccgctttgattttactaca
gctgtgatcagcaacacagttgttggagagacaactccacttactcctatggttgctacc
tctgaatcagtcacagaaatcacagccagtagttttgtagtctcctgggtttccgcttct
gacactgtatcaggattccgtgtggaatatgagctcagcgaggagggcgacgaacctcag
tatcttgatctcccaagcacagccacctctgttaacatccctgacttgcttcctggtcgc
aagtacatagttaatgtctaccagatctcagaagaaggagagcaaaacctgatcctgtcc
acgtcacagacaacagcaccagatgcacctccagagcacacggtggaaagtgtggatgac
acctcaattgtcgttagctggagcagaccacaggctcccattacaggttacagaattatc
tatgcaccgtcagtggaagggagcagcactgagctgaacctgcctgatactgctacctct
gtaaccctcagtgatttaatgcctggtgttcagtataatatcagcatttatgcagtggaa
gaaaatcaggagagtactcctgtctttatccagcaggaaaccacaggtgtcccacgtgca
gatgatattccttcacccagagatctacagtttgtggaagtttctgatgtcaaaattacc
atcatgtggaccccacctgagagcactgtgtctggctatcgtgtggaggtgatcccagtt
caccaccctggtgaacatggacagagactgcctattaccaggagttcctttgctgaggtc
atcgaccttctacctggaacaacctatgtctttaagatctttgctgtgagccatgggagg
gagagcaaaccattgactggagagcaaaccaccaaactggatgcccccaccaacctgagg
tttatcaatactactgaatcttcagtgttggtgacctggactccaccacatgctccaatc
tcaggatacagactgactataggtcccacgagaggaggccagccaaggaactataatgtg
ggaccatctgtcattaaatacctgttaaagagtctgcagcctgggactgagtatactgta
taccttgtagcagtgaaaggcaaccagcaaagcaccagagaaactggggtcttcacaact
ttgcagccagtgggctcaatccctctctatcacacagaagtgacagaaacatccattgta
gttacctggacacctgcaccaagaattggtttcaagctgggtgtacgaccaagtcaaggt
ggagaagccccacgggaggtgatttctgaatctggtagcattgtcatatctggcctgact
cctggagtagaatacatctacagcatttcagtcctgatggacggcgaggagagagagaat
ccaatcatcaagagtgtagttacaccattgtccccaccagctacccttcatttggagcct
aacccagacacaggagtcctgactgtatcctgggatagaagtaccactccaggtatttct
gggtacagaattaccactgcccctaccagtggacagcaaggttacaccctggaagaagtg
gtcagtgcagaacagacttactgcacctttgaaaatttgagccctggagtggaatacaac
gtcagtgtgtattcagtcaagggcaaccaggaaagcatccccatctccaaaaccatcaca
caagctgttcctgctccaactgacctgagcttcaccagtgtgggtcccgatgctatgaga
gtggcatggattcctccaacctctattgtcctgagcagtttcctagtgcgttactcccca
gtgaagaatgaggaagatgttgcagagctgactatttcgcccactgacagatcagtgtat
ttacaaaatctcctgcctggcactgaatatctggtgaaggtctatagcatctctgagcac
catgaaagtgtccctttgactggtgtgcagaaaacaggtattgattccccaatgggcatt
gacttttcggatataacagcaaacacttttaccgtccattggattgctcctcgtgctacc
atcactggctacagagttcgacaccagttggagcatggtggtggtagacccaaggaagac
cgtattccaccttctcggaattccatcacactcactaacctggttcccgggtccgagtat
gtggtcagcattattgctttcaatggcagagaagatagcttgcccttggtcggccagcaa
tctacagtgtctgatgttccacaggacttggaagttactcccaccagccccacaagccta
aggatttcctgggatgctccagcagtgacagtgagatactatagaatcacctatggtgaa
acaggtggaagtagccctgtccaggagtttacagtgcctggcaccgtatctgatgctaac
attagtggccttaagcctggagtagactataccatcacagtgtatgcagtaacaggccgt
ggagacagtcctgccagcagcaagccagtcactgttacgtacaaaatagagattaacaca
ccatcccagatgcaagtgactgatgttcaggataacagtatcagtgtcagatgggtgcct
tcatcttctccagtcacaggttatcgagtgacaactgttcccaaggatggccacggaccc
acaaaaactaaaaccgtccctgcagatcaaaccgaagtcactgttgagggcctgcagccc
acagtcgagtatgtgattagtgtctatgctcagaatcaaaatggagaaagcgaacctctg
tctgagacaactgttaccaacattgatcgccctaaaggactgacattcactgaggtggat
gttgattccatcaaaattgcttgggaaagcccacaagggcaagtcaccagttacagggtg
acctactcaagccctgaggatggaatccatgagctattgcctgccccagatggtgaagac
gacactgctgagctgcatggcctcaggcctggttctgagtacactgtcagtatcgttgcc
ttacatgatgacaaggagagccagcccctgactggaacccagtccacagcaattcctcct
ccaacaaacctgaactttgtccaggtgactccaaccagcctgatggtcacctggaatgca
cctaatgttcgtctcaccggctacagagtccgagtgaatcccaaggaaaaaactgggccg
atgaaagaaatcaacctctccccagacagcacatctgctgttgtatcaggattaatggtg
gcaaccaaatatgaagtcagcgtgtatgctctgaaggactctctaactagtcgaccagcc
cagggtgtcatcactacccttgagaatgtcagtcctccccggagggcccgtgtaggtgat
gttactgagacaaccatctcaatcaactggcgcaccaagacagagaccatcactggtttc
caggttgatgccatcccagcaagtggccagaaccccattcgaaggactattaggcctgat
cttagaatgtacaccattactggcttgcaaccaggcactgactacaagatccatctttat
gcactgaatgacaatgcccgcagttccccagttgtgattgatgcttctacaaatgttgat
gctccttcaaacctgcaattcctcacaaccacaagcaactccctgctggttacctggcag
cctcccagggccaagattacgggctatatcatcaagtacaataaacctggagcacagcct
aaagagttgcttccccgaccacgcccgggtaccacagaggccactataattggtctggag
ccaggaacagaatataccatctatatcattgctgtgaagaacaatcaaaagagtgaacca
ttgattggcaggaaaaagacagatgagcttcccacgctggtaacccaaactcaccccaat
cagccagagattctggatgttccttccatcgatgagaggcccccttacttcacaaacaac
aggtatgacaatggaaatggtatccaacttccaggcaccacaggtcagcagccatcaata
ggacaccagggacagcaagttttctttgaggaacatggatttagacggactactccaccc
accacagcaacccccagtagacacaggccaagaccgcaaccaccaaatgtggatgaaaca
gttgaactcgctaggtacccaataccacatgtagttgaaccttcatatcctcactcccgt
gggccaaggcgcaatgacactacaggccaggaagctctttctcggacaacgatctcctgg
aggcccttattggagagcactgaatatctcatctcatgtctcccagtcggcaatgatgaa
gagactttgcagttcagagttcctggaactgcctctagtgctactctgaccggccttact
agaggtgctacctacaacatcatagtggaagcattaaaagatcataggagacaaaaagtt
ctggaggaggttgtcacagtggacaatactgtgtctgaaggattaaaccagccaactgac
gacagttgttatgatacatacactggctccttctattccattggagaggaatgggagcga
ttatctgaaactggctttaaactctggtgccagtgcttaggttttggcagtggtcatttc
agatgtgattcatctaaatggtgccatgataatggtgtgaactacaagattggcgaaaag
tgggaccgtcaaggcgagaatggacagatgatgagctgcacatgtcttggaaatggaaag
ggagaattcaagtgtgaacctcatgaggcaacatgctatgatgacggtaagatgtaccac
gtaggagaacaatggcagaaggaatatcttggtgctatctgttcctgtacttgctatgga
ggacagcagggttggcgctgtgacaactgccgcaggcccaatgtcgacgcagcctcagaa
ggctcttctggccatacctacacacgttttacacagagataccaccagagtacaaatact
aatgtcaactgcccaattgagtgcttcatgcccttagatgtacaggcagacacacaacat
ccacgaggacaataa
DBGET
integrated database retrieval system
