Alligator mississippiensis (American alligator): 102575214
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Entry
102575214 CDS
T03087
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102575214 (SMARCAD1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102575214 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
CUE
Motif
Other DBs
NCBI-GeneID:
102575214
NCBI-ProteinID:
XP_006265326
LinkDB
All DBs
Position
Un
AA seq
1027 aa
AA seq
DB search
MSQFNLDRFRFEKRSQVGEQENLPSPLPAARPPAASDTAASNGGGGEEDNEVTDDSSRPD
TPASDVTEKTEDSSVSETPEVEKTTKLSHFKNRRNLQYIDVSSDSEDQESQNCSTTKYNN
VLQRDVIVISEQSDDEQPQDEVPNLTYANGMDQSQNMEEEDIIDAKLQTLKELFPQRNDQ
ELLQLIKSTHTMDEAIAAALTHSDEAASRKRKLEQSPRENSDDDDNDDQIAKKQKADSQE
GSASQKEWEKQETLVKKLQNEFPGLDKKELRDVLQEHNWVFHEALEALKVFAEDQEDAQN
PSISEVSNWNEVSTNSKNDQNSAKVKMKQKSSTKTQNGFRKKDKGKKGIWSTKREMEDSE
YESASEGGSSLDEDYSSGDEVMEDGCTTKILNFLQDASLGELTWIPQCSQKKAQKIIELR
PFNSWEALVSKMSKTNGLSEDIIWNCKTLLRERDVVLKLMNKCEDISNKLTNQVTRITED
GGCGWNIEQPSILNQSLELKPYQKIGLNWLALLHQHGLNGILADEMGLGKTIQAIAFLAY
LYQQGNKGPHLIVVPASTLDNWIREVNLWCPDLGVLFYYGSQEDRKHLRIDINNKAVDFN
VIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSVRYQHLMTINAMNRLLLTGT
PVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKTAEEQSIYEKERIAHAKQIIKPF
ILRRVKDEVLKQLPPKRDLIELCAMSEKQEQLYYDLLNKIKKSIDSEEKNSDTGNVMMQL
RKMANHPLLHRQYYTDDKLRIMSTLMLKEPTHCDANPDLIFEDMTVMTDFELHLLCKQYA
NVSDFKLEMDQILDSGKFRTLEHILSDLKEKGDRVVLFSQFTMMLDILEVLLKQQQHRYI
RLDGKTQISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ
AEDRCHRVGQTREVQVIKLISKGTIEESMLKISQQKLKLEQDMTAADLGEGNIPADIATL
LKASLGL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtttaatctggaccgctttcgctttgagaagaggagccaggtaggggagcag
gaaaacctgccctctcccctacccgctgctcggcccccagctgcttcagacactgcagca
agtaacggtggcggtggggaggaggataatgaggtgaccgatgacagcagcaggccggat
acgccagcctcagatgtgacagagaaaacagaagattcaagtgtctcagaaaccccagaa
gtagaaaagacaacaaagctctcacatttcaaaaatcgcagaaatttacaatacattgac
gtatcctctgacagtgaagatcaggaatcacaaaattgctctactacaaaatacaataat
gttcttcagagggatgttattgtgatttctgaacagtctgacgatgagcagcctcaagat
gaagtccctaatttgacgtatgcaaatggtatggaccaatcgcaaaacatggaggaggaa
gacatcatagatgctaagctccaaacactgaaggaactctttccacaaagaaatgaccag
gaattactacaattgataaagtcaacacacacaatggatgaagcaatagctgctgctttg
acgcacagtgatgaagctgcttcccgaaaaagaaaactagaacagtctcctagagaaaat
tcagatgatgacgacaatgatgaccaaattgcaaaaaagcaaaaagctgactctcaggaa
gggtcagcatctcaaaaagaatgggaaaaacaagaaactcttgtaaagaaactgcaaaat
gaattccctggtttggataaaaaggaactgagagatgtacttcaagaacataattgggta
tttcatgaagcactggaagccttaaaagtatttgcagaagaccaagaggatgcacaaaat
ccttccataagtgaagtttctaattggaatgaagtctccacaaatagcaaaaatgatcag
aacagtgcaaaggtgaagatgaaacagaaatcttctacaaaaactcagaatggctttagg
aaaaaagataaaggcaaaaaaggcatttggagtactaaaagagaaatggaagattcagaa
tacgagtcagcctcagaaggtggtagctcccttgatgaggactacagcagtggtgatgaa
gtgatggaggatggctgtacaactaaaatacttaacttcctgcaagatgcttcactgggt
gaactcacttggatccctcagtgttctcagaaaaaggctcagaagataatagagctccgg
ccctttaatagctgggaagctctggtttcaaaaatgagcaagacaaacggtttgtcagaa
gatataatatggaattgcaaaactctgctcagagaaagagatgtggttctaaaacttatg
aacaaatgtgaagatatttcaaataaattgacaaaccaagtgaccagaatcactgaggat
ggtggatgtggatggaatatagaacaaccttctattctgaatcaaagtttggaactcaag
ccatatcagaagattggtttgaattggttagcactactccaccaacatggattgaatggc
attctagctgatgaaatgggtttaggaaagacgattcaagctattgcattcctggcctat
ctctaccaacagggtaataaaggtcctcacttgattgttgtgccagcttcaactttagat
aactggataagagaagttaatctgtggtgtccggatcttggtgtccttttttattatgga
tcccaggaagatcggaaacatctcagaattgacattaataataaagctgtagactttaac
gtgattgtgaccacgtataattgtgcaattagcagttcagatgaccgaagtctatttcgt
cggttgaaacttaactatgcaatcttcgatgaaggccacatgttaaagaacatgggttct
gtacgttaccagcaccttatgacaattaatgcaatgaatcgtctgctactaacaggaact
ccagttcaaaataatctattggaattaatgtctctcttgaattttgttatgccacatatg
ttcagtagcagcacaagtgaaatccggaggatgttctcttcaaaaacaaaaactgcagaa
gaacaaagtatatatgaaaaggagaggattgcacatgcaaagcagataataaaaccattt
atcttgagaagagtaaaagatgaagttcttaaacagctgcctcccaaaagagatcttatt
gagttgtgtgcaatgtcagagaaacaagaacagctctactatgacctcttgaacaagata
aagaaatctattgacagcgaggagaagaactcggacacaggcaatgtcatgatgcaactg
agaaaaatggctaaccatcctctcttacatcgtcaatactacacggatgataaacttagg
attatgtcaactcttatgctcaaggaacccacacattgtgatgctaatcctgacctcatc
tttgaagatatgaccgtgatgacagattttgagcttcatttgctttgtaaacaatatgcc
aatgtcagtgacttcaagctagagatggaccagattttggattctggaaaatttagaact
ctagaacatattctctctgatcttaaagaaaagggtgatagagttgttttgttcagccag
tttactatgatgctagacatcttagaagttcttctgaaacagcagcagcatagatatatt
aggctggatggaaaaacacagatttctgaaaggatacatctaatagatgagttcaatacg
gatatgggtatatttgttttcctgctctcaaccaaagctggtggccttggaataaatttg
acctcagcaaatgttgtcattcttcacgacattgactgcaacccttacaatgacaagcaa
gcagaggatcgatgtcacagagtaggtcagaccagagaagtacaagtcataaagctaatc
agtaaagggactatagaggagtccatgctcaaaatcagtcagcagaaattgaagctagaa
caggatatgactgcagcagatttgggagaagggaatattccagcagatatagccacttta
ttaaaagcttcactaggtctctaa
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integrated database retrieval system
