Alligator mississippiensis (American alligator): 106739025
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Entry
106739025 CDS
T03087
Symbol
UBC
Name
(RefSeq) ubiquitin C
KO
K04551
ubiquitin B
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04120
Ubiquitin mediated proteolysis
amj04137
Mitophagy - animal
amj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106739025 (UBC)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106739025 (UBC)
04137 Mitophagy - animal
106739025 (UBC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
106739025 (UBC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
106739025 (UBC)
Ubiquitin system [BR:
amj04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
106739025 (UBC)
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of breast milk
106739025 (UBC)
Exosomal proteins of other body fluids (saliva and urine)
106739025 (UBC)
Exosomal proteins of colorectal cancer cells
106739025 (UBC)
Exosomal proteins of bladder cancer cells
106739025 (UBC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
106739025
NCBI-ProteinID:
XP_014454005
LinkDB
All DBs
Position
Un
AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacgggcaagaccatcactctcgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaagaaggcattccccccgaccag
cagaggctcatctttgctggtaagcagctggaagatggacgcaccctgtctgactacaac
atccagaaggagtccaccctgcacctggtgctgcgcctgaggggtggcatgcagatcttc
gtgaagaccctgacgggcaagaccatcactctcgaggttgagcccagtgacactatcgag
aacgtgaaggccaagatccaggacaaggagggcattccccctgaccagcagaggctcatc
tttgctggcaagcagctggaagatggccgcaccctgtctgattacaatattcagaaggag
tccaccctgcacctggtgctgcgcctgaggggtggcatgcagattttcgtgaagaccctg
actggcaagaccatcaccttggaggttgagcccagtgacaccatcgaaaacgtgaaggcc
aagatccaggacaaagaaggtattccccctgaccagcagaggctcatctttgctgggaaa
cagctggaagatggccgcaccctgtccgactacaatattcagaaggagtccaccctgcac
ctggtgctgcgcttgagaggtggcatgcagatcttcgtgaagaccctgacgggcaagacc
atcactctcgaggtggagcccagtgacaccattgagaacgtgaaggccaagatccaggac
aaagaaggcattccccccgaccagcagaggctcatctttgctggcaagcagctggaagat
ggacgcaccctgtccgactacaacatccagaaggagtccaccctgcacctggtgctgcgc
ctgaggggtggcatgcagatctttgtgaagaccctgactggcaagaccatcactctcgag
gtggagcccagtgacactatcgagaacgtgaaggccaagatccaggacaaagaaggcatt
ccccccgaccagcagaggctcatctttgctgggaaacagctagaagatggccgcactctg
tccgactacaacatccagaaggagtccaccctgcacctggtgctgcgcctgaggggtggc
atgcagatcttcgtgaagaccctgaccggcaagaccattaccctggaggtggagcccagt
gacaccattgagaacgtgaaggccaagatccaggacaaagaaggcattccccccgaccag
cagaggctcatctttgctggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtctaccctgcacctggtgctgcgcctgaggggtggtaactga
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