Ailuropoda melanoleuca (giant panda): 100464843
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Entry
100464843 CDS
T01329
Symbol
KRT5
Name
(RefSeq) keratin, type II cytoskeletal 5 isoform X1
KO
K07605
type II keratin, basic
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100464843 (KRT5)
04147 Exosome [BR:
aml04147
]
100464843 (KRT5)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
100464843 (KRT5)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
100464843 (KRT5)
Exosomal proteins of other body fluids (saliva and urine)
100464843 (KRT5)
Exosomal proteins of colorectal cancer cells
100464843 (KRT5)
Exosomal proteins of bladder cancer cells
100464843 (KRT5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
ATG16
DUF745
Alanine_zipper
Baculo_PEP_C
DUF5667
ATG17_like
APG6_N
Taxilin
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
100464843
NCBI-ProteinID:
XP_011228205
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All DBs
Position
16:complement(42180325..42186483)
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AA seq
630 aa
AA seq
DB search
MSRQSSVSFRSGGGRSFSTASAITPSVSRTSFTSVSRSGGGGGGFGRVSLGGACGAGGYG
SRSLYNLGGSKRVSISTSGGTFRNRFGAGAGAGGGYGFGGGAGSGFGFGGGAGGGFGLGG
GAGFGGGFGGPGFPYGFGGGAGSGFGFGGGAGGGFGLGGGAGFGGGFGGPGFPVCPPGGI
QEVTVNQSLLTPLNLQIDPAIQRVRTEEREQIKTLNNKFASFIDKVRFLEQQNKVLDTKW
TLLQEQGTKTVRQNLEPLFEQYINNLRRQLDSILGERGRLDSELRNMQDLVEDFKNKYED
EINKRTTAENEFVMLKKDVDAAYMNKVELEAKVDALMDEINFMKMFFEAELSQMQTHVSD
TSVVLSMDNNRSLDLDSIISEVKAQYEEIANRSRTEAESWYQTKYEELQQTAGRHGDDLR
NTKQEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDAKNKLAELEDALQ
KAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLSGEGVGPVNISVITNSVSS
AYGGGSGFGGGLGGGLGGGLGGGLGGGGGGSYYSSSSGGVGLGGGLSVGGSGFSAGSGRS
LGMGFGSGGGSSSSVKFVSTTSSSRKSFKS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagtcgagtgtatccttccggagtggaggcggccggagcttcagcactgcc
tctgccattactccgtctgtctcccgcaccagcttcacgtccgtgtcccggtccgggggt
ggcggtggcggctttggcagggtcagcctagggggtgcctgcggagcgggtggctacggc
agccggagcctgtacaacctggggggctccaagagggtctccatcagcacgagcggtggc
accttcaggaaccgatttggtgcaggtgcaggtgctggaggcggctatggcttcggaggt
ggagctgggagtggatttggttttggcggtggagctggtggaggctttgggctcggtggt
ggtgctggctttggaggaggcttcggtggtcctggcttcccctatggcttcggaggtgga
gctgggagtggatttggttttggcggtggagctggtggaggctttgggctcggtggtggt
gctggctttggaggaggcttcggtggtcctggcttccctgtgtgcccccctggaggcatc
caagaggtcaccgtcaaccagagcctcctgacccccctcaacctgcaaatcgaccccgcc
atccagcgggtgcggacggaggagcgcgagcagatcaagaccctcaacaacaagttcgcc
tcgttcatcgacaaggtgcggttcctggagcagcagaacaaggtcctggacaccaagtgg
actctgctccaggagcagggcaccaagaccgtgaggcagaacctggagcccttgtttgag
cagtacatcaacaacctcaggagacagctggacagcatcctgggcgagaggggccgcctg
gactcggagctgaggaacatgcaggacctggtggaggacttcaagaacaagtacgaagat
gaaatcaacaagcgtaccaccgctgagaatgagtttgtaatgctgaagaaggatgtggac
gctgcctacatgaacaaggtggagctagaggccaaggtcgatgccctgatggatgagatc
aacttcatgaagatgttctttgaggcggagctgtcccagatgcagacccacgtctcagac
acatccgtggtgctgtccatggacaacaaccgctccctggacctggacagcatcatctct
gaggtcaaagcccagtatgaggagattgccaaccgtagccggacagaagccgagtcctgg
taccagaccaagtatgaagagctgcagcagacagcgggccggcatggggatgatctccgc
aacaccaagcaagagatctccgagatgaaccggatgatccagaggctgagagctgagatc
gacaatgtcaagaagcagtgcgccaacctgcagaacgccatcgcggatgccgagcagcgt
ggggagctggccctcaaggacgccaagaataagttggccgagctggaggacgccctgcag
aaggccaagcaggacatggcccgcctgttgcgcgagtaccaggagctcatgaacaccaag
ctggccctggacgtggagatcgccacctatagaaagctgctggagggcgaggagtgcaga
ctgagtggagaaggagttggaccagtcaacatctctgtcatcacaaacagcgtgtcctct
gcctatggcggcggcagtggctttggcggtggcctcggtggaggtcttggtggaggtctt
ggcggtggtcttggaggaggtggcggcggaagctactactccagcagcagtggaggcgtt
ggcctgggcggcgggcttagtgtggggggctctggcttcagtgcaggcagtggccgaagc
ctggggatgggctttggcagtggtgggggcagtagctccagtgtgaagtttgtctccacc
acctcctcttcccggaagagcttcaagagctaa
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