Ailuropoda melanoleuca (giant panda): 100468425
Help
Entry
100468425 CDS
T01329
Symbol
TBPL1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03022
Basal transcription factors
aml05016
Huntington disease
aml05017
Spinocerebellar ataxia
aml05165
Human papillomavirus infection
aml05166
Human T-cell leukemia virus 1 infection
aml05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100468425 (TBPL1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100468425 (TBPL1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100468425 (TBPL1)
05165 Human papillomavirus infection
100468425 (TBPL1)
09164 Neurodegenerative disease
05016 Huntington disease
100468425 (TBPL1)
05017 Spinocerebellar ataxia
100468425 (TBPL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100468425 (TBPL1)
03021 Transcription machinery [BR:
aml03021
]
100468425 (TBPL1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100468425 (TBPL1)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100468425 (TBPL1)
RNA polymerase III system
TFIIIB
100468425 (TBPL1)
RNA polymerase I system
SL1/TIF-1B
100468425 (TBPL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
100468425
NCBI-ProteinID:
XP_002922334
UniProt:
D2HJ41
LinkDB
All DBs
Position
10:80429348..80462818
Genome browser
AA seq
186 aa
AA seq
DB search
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKIICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVATAVEQIYPFVFE
SRKEIL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacagtgatgttgcattggacattctaattacaaatgtagtctgtgttttt
agaacaagatgccatttgaacttaaggaagattgctttggagggagcaaatgtaatttat
aagcgtgatgttggaaaagtattaatgaagcttagaaaacctagaattacagctacaatt
tggtcctcaggaaaaattatttgcactggagcaacaagtgaagaagaagctaaatttggt
gccagacgtttagcgcgcagtctgcagaaactaggttttcaggtaatatttacagatttt
aaggtcgttaacgttttggcggtgtgtaacatgccatttgaaatccgtttgccagaattc
acaaagaacaatagacctcatgccagttacgaacctgaacttcatcctgctgtgtgctat
cggataaaatctctaagagctacattacagattttttcaacaggaagtatcacagtaaca
gggcccaacgtaaaggccgttgcgactgctgtggaacagatttacccatttgtgtttgaa
agcaggaaagaaattttataa
Ailuropoda melanoleuca (giant panda): 100482953
Help
Entry
100482953 CDS
T01329
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03022
Basal transcription factors
aml05016
Huntington disease
aml05017
Spinocerebellar ataxia
aml05165
Human papillomavirus infection
aml05166
Human T-cell leukemia virus 1 infection
aml05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100482953 (TBP)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100482953 (TBP)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100482953 (TBP)
05165 Human papillomavirus infection
100482953 (TBP)
09164 Neurodegenerative disease
05016 Huntington disease
100482953 (TBP)
05017 Spinocerebellar ataxia
100482953 (TBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100482953 (TBP)
03021 Transcription machinery [BR:
aml03021
]
100482953 (TBP)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100482953 (TBP)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100482953 (TBP)
RNA polymerase III system
TFIIIB
100482953 (TBP)
RNA polymerase I system
SL1/TIF-1B
100482953 (TBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DDHD
TFIIA
EPL1
VPS13_N
DUF7518
Presenilin
Motif
Other DBs
NCBI-GeneID:
100482953
NCBI-ProteinID:
XP_011230619
Ensembl:
ENSAMEG00000017055
UniProt:
G1MFA2
LinkDB
All DBs
Position
10:110539977..110563713
Genome browser
AA seq
324 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSLLEEQQRQQQ
QQQAQQQQQQAQQQQQQQAQQQAVAAVQQSTSQQATQGASGQTPQLFHSQTLTTAPLPGT
TPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPK
RFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKI
QNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGA
KVRAEIYEAFENIYPILKGFRKTT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaacaacagcctgccaccttatgctcagggcctggcctcccctcagggtgcc
atgactcctggaatccctatcttcagtccaatgatgccttatggcacaggactgactcca
cagcctatccagaacaccaacagcctttccctcttggaggagcagcaaaggcaacagcag
cagcaacaagctcagcagcagcagcaacaggcccagcagcagcagcagcagcaggcccag
cagcaggcagtggcagctgttcaacagtcaacatcccaacaggcaacacagggggcctca
ggccagacaccacagctcttccactcacagactcttaccactgctcccttgccaggcacc
actcccctgtatccctcccccatgactcccatgacccccattacccctgccacaccagct
tctgagagctcggggatcgtgccacagctgcaaaatattgtatccacagtgaatcttggc
tgtaagcttgacctaaagaccattgcacttcgtgcccgaaatgcggaatataatcccaag
cgatttgctgctgtaatcatgagaataagagagccccgaaccactgcactgatattcagt
tctgggaaaatggtgtgcacaggagccaagagcgaagaacagtccagactagcagcaagg
aaatatgccagggttgtacagaagttaggttttccagcaaagttcttggacttcaagatt
cagaacatggtggggagctgtgatgtgaagttccctataaggttagaaggccttgtgctg
acccaccagcagtttagcagttacgagccagagttgtttcctggtttaatctacagaatg
atcaagcccagaattgttcttcttatttttgtttctggaaaagttgtattaacaggtgct
aaagtccgagcagaaatttatgaagcatttgaaaatatctaccctattctaaagggtttc
aggaagacgacataa
Ailuropoda melanoleuca (giant panda): 105242046
Help
Entry
105242046 CDS
T01329
Symbol
TBPL2
Name
(RefSeq) TATA box-binding protein-like protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03022
Basal transcription factors
aml05016
Huntington disease
aml05017
Spinocerebellar ataxia
aml05165
Human papillomavirus infection
aml05166
Human T-cell leukemia virus 1 infection
aml05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105242046 (TBPL2)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
105242046 (TBPL2)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
105242046 (TBPL2)
05165 Human papillomavirus infection
105242046 (TBPL2)
09164 Neurodegenerative disease
05016 Huntington disease
105242046 (TBPL2)
05017 Spinocerebellar ataxia
105242046 (TBPL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
105242046 (TBPL2)
03021 Transcription machinery [BR:
aml03021
]
105242046 (TBPL2)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
105242046 (TBPL2)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105242046 (TBPL2)
RNA polymerase III system
TFIIIB
105242046 (TBPL2)
RNA polymerase I system
SL1/TIF-1B
105242046 (TBPL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Auxin_repressed
Motif
Other DBs
NCBI-GeneID:
105242046
NCBI-ProteinID:
XP_034504579
LinkDB
All DBs
Position
20:complement(29954884..29984510)
Genome browser
AA seq
445 aa
AA seq
DB search
MTPIKVVGVWITLQALSVGLATDRGPRGGAGRGREPALPLPRCISPPPQARARPPRPAQP
RALAGLINGSCATCAQSGSACSSTCLGAWPFSALLKVAPPPMEEEQTYLELYLDQCVAQD
DLAPPGSPLLSPVVPDEVYIPNSSHPETVFNSHLEEVKETSGPFSSVDLSFLPDELTQEN
KDQSIIRSKHEIEENCKAQSQQSRLSLPREQDIGLGLISNSSFSNSHSHLYPGDADSVQP
SLEKPDSMPLVSIAPMTPMTPVSECSGIVPQLQNIVSTVNLACKLDLKKIALHAKNAEYN
PKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPARFLDF
KIQNMVGSCDVRFAIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLT
GAKERSEIYEAFENIYPILKGFKKA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccatcaaggtggttggggtgtggattactctacaagcactctcggttggttta
gccacggaccgtgggccgcgcggaggcgcaggccgaggccgggaacccgcgctgcccctg
ccccgctgcatctcgcccccaccgcaggctcgggcccgacccccccgccccgcacagccg
cgtgcgctcgccgggctgataaatggctcgtgtgccacgtgtgctcagtcgggctcggct
tgtagctcgacttgcctgggcgcttggcccttctcggcccttctaaaagtggcgcctcca
cccatggaggaggagcagacctacctggagctctatctggaccagtgtgtcgcccaggat
gacctcgctccgcccgggtcaccgctgctcagcccagttgtacctgatgaagtgtatata
ccgaattcatcccatccagagactgtgtttaattcacatcttgaagaagtcaaagaaaca
tctggccctttctcatctgtggatcttagcttcctaccagatgaacttacccaagaaaat
aaagaccagagtatcattagaagcaagcatgaaattgaagaaaattgtaaagctcaaagt
cagcaaagtaggttgtcattacccagagaacaggacattggtctgggcttaataagcaac
agcagtttctctaattcccattcacatctgtaccctggtgatgctgactcagtccagccc
tctcttgagaaaccagactccatgcctctggtgtccatagctcctatgacaccaatgacc
cctgtttcagaatgttctggaattgtgcctcaactacagaatatagtttccactgtaaac
ctggcctgtaaattggatctgaagaaaatagctttgcatgcaaaaaatgcagagtataac
ccaaagaggtttgctgctgtcataatgaggatccgagagcccagaacaacagccctcatc
tttagctctgggaaaatggtctgcacgggagccaaaagtgaagagcagtctcgacttgca
gcgaggaagtatgctcgtgtggtgcaaaagctgggcttcccagccagattcctcgatttt
aaaattcagaacatggttggaagctgtgatgtgagatttgccatcagactggaaggtttg
gtgctgacccatcagcagttcagtagttatgaaccagaactgtttcctggccttatctac
agaatggtaaaaccacgaattgtgttgcttatcttcgtatctggaaaagttgtgttgaca
ggtgccaaagaacgttctgagatctatgaagcatttgaaaacatctatcctattctaaag
ggttttaaaaaagcctga
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integrated database retrieval system