Ailuropoda melanoleuca (giant panda): 100473834
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Entry
100473834 CDS
T01329
Symbol
APOBEC1
Name
(RefSeq) C->U-editing enzyme APOBEC-1
KO
K16932
C->U-editing enzyme APOBEC1 [EC:
3.5.4.36
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100473834 (APOBEC1)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.36 mRNA(cytosine6666) deaminase
100473834 (APOBEC1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
APOBEC1-ACF complex
100473834 (APOBEC1)
mRNA cycle factors
Common to processing body (P body) and stress granule
100473834 (APOBEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APOBEC4_like
APOBEC1
SNAD4
NAD1
APOBEC2
APOBEC_N
NAD2
APOBEC4
APOBEC3
APOBEC_C
dCMP_cyt_deam_1
Bd3614-deam
Motif
Other DBs
NCBI-GeneID:
100473834
NCBI-ProteinID:
XP_011235501
Ensembl:
ENSAMEG00000007098
LinkDB
All DBs
Position
16:8597055..8605162
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AA seq
235 aa
AA seq
DB search
MASDKGPSGGDATSRRRIEPWEFEVFFDPRQLRKEACLLYEIQWGTSRKIWRNSGKNTTN
HVEINFIEKFTLERQYCPSIHCSVTWFLSWSPCWECSKAIRAFLSQHPSVTLVIYVARLF
WHMEPQNRQGLRDLINSGVTIQIMSVPEYDHCWRNFVNYPPGKDHWPGYPVLWMKLYALE
LHCIILSLPPCLKISRRNQNQLTLFRLTLQNCHYQTIPPHVLLATGLIQLPVTWR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgacaaaggtccttcaggtggagatgccacctcgaggagaagaatcgaaccc
tgggaatttgaagtcttctttgaccccagacaactccgtaaagaggcctgcctgctctat
gaaatccagtggggcacaagccgtaagatctggcgaaactcaggcaaaaacaccaccaac
catgtggaaatcaattttatagaaaaatttactttggaaagacagtattgcccgtccatc
cactgctccgtcacctggttcctgtcctggagtccctgttgggaatgctccaaggccatt
agagcatttttgagtcaacaccctagtgtgactctggttatttacgtagcacggcttttc
tggcacatggagccacaaaaccggcaaggactcagagacctcattaacagtggtgtgact
atccagattatgagcgtcccagaatatgatcattgctggaggaattttgtcaactaccca
cctgggaaagatcactggccaggataccctgtgctatggatgaagctatatgcgctggag
ctccactgcataattctaagtctccctccttgtttaaagatttcaagaagaaatcagaat
cagcttacattgttcagacttactcttcaaaattgccattaccaaactattccaccccat
gtccttttagctacagggttgatacaacttcctgtgacttggagatga
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