Ailuropoda melanoleuca (giant panda): 100473872
Help
Entry
100473872 CDS
T01329
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04136
Autophagy - other
aml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100473872 (ATG4C)
04136 Autophagy - other
100473872 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100473872 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100473872 (ATG4C)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100473872 (ATG4C)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
100473872 (ATG4C)
Membrane trafficking [BR:
aml04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100473872 (ATG4C)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100473872 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
100473872
NCBI-ProteinID:
XP_011221311
Ensembl:
ENSAMEG00000014990
UniProt:
D2H7H2
LinkDB
All DBs
Position
2:36637784..36726592
Genome browser
AA seq
458 aa
AA seq
DB search
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKLLP
ARSGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALNIENSDSESWTSNTVKKFTASFEASLSGERELKTPTVSQKE
TIRRYSDDHEMQNEIYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHI
LRKAVEETRHPDLQGITIYVAQDCTVYSSDVIDKQCTSMASDNTDDKAVIILIPVRLGGE
RTNTDYLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVN
GHSRDYDFTSTTTNEEDFFSEDEKKRLKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggaacagatgaagttgacaagctaaaaactaaatttatatctgcttgg
aacaacatgaaatatagttgggtgttgaaaacaaaaacatattttagtagaaattcccct
gtattattgcttggaaaatgctaccattttaagtatgaagatgaaaataaactgctgcct
gcaagatcaggatgtacaatagaagatcatgtaattgcgggaaatgtagaagaatttcgt
aaagatttcatttcaagaatatggttgacctatagggaagaatttcctcaaatagaaggc
tcggctttgacaacagactgcggttggggctgtacattaagaactggccagatgctattg
gctcaaggactcatactacactttcttggtagagcttggacctggcctgacgctttgaac
attgaaaattcagactctgaatcatggacttccaacactgtaaaaaaatttaccgcatca
tttgaagcatcactttcaggggaaagagaactcaaaaccccaacagtttctcagaaggaa
acaatcaggagatattctgatgatcatgaaatgcaaaatgaaatttatcacaggaaaatc
atctcttggtttggtgattcccctttggctctctttggtttgcatcaactaatagaatat
ggaaagaagtctgggaaaaaagccggagattggtatggaccagctgtggttgctcatatt
ttaagaaaagcagttgaagaaacaagacaccctgatttacaaggaataactatttatgtt
gcacaagactgtacagtttacagttctgatgtaattgataaacagtgtacttccatggcc
tctgataatacagatgacaaagctgttattattctaatccctgttagacttggtggggaa
agaaccaacaccgactacttagattttgtaaagggtattttaagccttgaatattgtgtg
ggtattattggtggcaaacctaaacagtcatactattttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccagtcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa
atcactaagatgctgaaaatttcttctaaggagaaatatcccttatttacttttgtaaat
ggtcattccagagactatgattttacatctactacaaccaatgaagaagactttttctca
gaggatgaaaagaaaagattaaaaagatttagcacagaagaatttgtcttgctctaa
DBGET
integrated database retrieval system
