Ailuropoda melanoleuca (giant panda): 100475450
Help
Entry
100475450 CDS
T01329
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
KO
K08526
retinoid X receptor gamma
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03320
PPAR signaling pathway
aml04659
Th17 cell differentiation
aml04919
Thyroid hormone signaling pathway
aml04920
Adipocytokine signaling pathway
aml04928
Parathyroid hormone synthesis, secretion and action
aml05200
Pathways in cancer
aml05202
Transcriptional misregulation in cancer
aml05207
Chemical carcinogenesis - receptor activation
aml05216
Thyroid cancer
aml05222
Small cell lung cancer
aml05223
Non-small cell lung cancer
aml05226
Gastric cancer
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100475450 (RXRG)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100475450 (RXRG)
03320 PPAR signaling pathway
100475450 (RXRG)
04919 Thyroid hormone signaling pathway
100475450 (RXRG)
04928 Parathyroid hormone synthesis, secretion and action
100475450 (RXRG)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100475450 (RXRG)
05202 Transcriptional misregulation in cancer
100475450 (RXRG)
05207 Chemical carcinogenesis - receptor activation
100475450 (RXRG)
09162 Cancer: specific types
05226 Gastric cancer
100475450 (RXRG)
05216 Thyroid cancer
100475450 (RXRG)
05222 Small cell lung cancer
100475450 (RXRG)
05223 Non-small cell lung cancer
100475450 (RXRG)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100475450 (RXRG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100475450 (RXRG)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100475450 (RXRG)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100475450 (RXRG)
Nuclear receptors [BR:
aml03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100475450 (RXRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
100475450
NCBI-ProteinID:
XP_002914218
Ensembl:
ENSAMEG00000006616
UniProt:
G1LJ94
LinkDB
All DBs
Position
8:120315261..120358892
Genome browser
AA seq
463 aa
AA seq
DB search
MYGNYSHFMKFPTGFGGSPGHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
PPLNALGSPYRVITSAMGPPSGALAAPPGLNLVAPPSSQLNVVNSVSISEDIKPLPGLPG
IGNMNYPSTSPGLLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggaattattctcacttcatgaagtttcccacaggctttggcggctcccccggc
cactccggctccacgtccatgagcccatcggcagccttgtccacagggaagccaatggac
agccaccccagctacacggacaccccagtgagtgccccccggaccctgagtgcggtgggg
ccccccctcaatgccttgggttctccataccgagtcatcacatctgccatgggcccgccc
tcgggagcgctggctgcgcctccaggactcaatctggtcgccccgcccagctcccagcta
aatgtggtcaacagtgtcagcatttcagaggacatcaagcccttaccagggcttcctggg
attggaaacatgaactatccatcaaccagccccggtttgctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtatacagttgtgaaggctgcaaa
gggttcttcaagagaaccataaggaaagacctcatgtacacgtgtcgcgataataaggac
tgcctcattgacaagcgccagaggaaccgctgtcagtactgccgttaccagaagtgcctg
gtgatgggcatgaagagggaagctgtgcaggaagaaaggcagaggagccgggagcgggcc
gagagcgaggcagaatgcgccagtagcggccatgaagatatgcctgtggagcggattcta
gaagctgaacttgctgttgaaccaaagacagaatcctatggtgatatgaacatggagaac
tcgacgaatgaccctgtcaccaacatatgccatgctgctgacaagcagcttttcactctt
gttgaatgggccaagcgcatcccccacttctctgacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgagctgctgattgcctctttctcccaccgctccgtctcc
gtgcaggatggcattctcctggccacgggcttacacgtccaccggagcagcgcccacagc
gccggggtcggctccatcttcgacagggtcctgactgagctggtctccaaaatgaaagac
atgcagatggacaagtcggagctggggtgcctgcgagccatcgtgctgtttaacccagat
gccaaggggctgtccaacccctcggaggtagagactctgcgagagaaggtttatgctacc
cttgaggcctacacaaagcagaagtatccggaacaacctggcaggttcgccaagctgctg
ctgcgcctcccagccctgcgctccatcggcttgaagtgcctggagcacctgttcttcttc
aagctcattggggacacgcccatcgacaccttcctcatggagatgctggagaccccgctg
cagatcacctga
Ailuropoda melanoleuca (giant panda): 100475696
Help
Entry
100475696 CDS
T01329
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
KO
K08525
retinoid X receptor beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03320
PPAR signaling pathway
aml04659
Th17 cell differentiation
aml04919
Thyroid hormone signaling pathway
aml04920
Adipocytokine signaling pathway
aml04928
Parathyroid hormone synthesis, secretion and action
aml05200
Pathways in cancer
aml05202
Transcriptional misregulation in cancer
aml05207
Chemical carcinogenesis - receptor activation
aml05216
Thyroid cancer
aml05222
Small cell lung cancer
aml05223
Non-small cell lung cancer
aml05226
Gastric cancer
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100475696 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100475696 (RXRB)
03320 PPAR signaling pathway
100475696 (RXRB)
04919 Thyroid hormone signaling pathway
100475696 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
100475696 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100475696 (RXRB)
05202 Transcriptional misregulation in cancer
100475696 (RXRB)
05207 Chemical carcinogenesis - receptor activation
100475696 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
100475696 (RXRB)
05216 Thyroid cancer
100475696 (RXRB)
05222 Small cell lung cancer
100475696 (RXRB)
05223 Non-small cell lung cancer
100475696 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100475696 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100475696 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100475696 (RXRB)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100475696 (RXRB)
Nuclear receptors [BR:
aml03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100475696 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
100475696
NCBI-ProteinID:
XP_002914382
Ensembl:
ENSAMEG00000001719
LinkDB
All DBs
Position
5:complement(28405176..28411847)
Genome browser
AA seq
532 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAASSLGGSGAPPP
PPMPHPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgtccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccagtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctccgccttctcctcct
gggctacccttaccaccttcagcagcctcatcccttggaggctccggggccccaccccca
cccccgatgccacaccccccactgggctccccattcccggtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactatggggtttacagc
tgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacatactcgtgc
cgggacaacaaggactgcaccgtggacaagcgccagcgaaaccgctgtcagtactgccgc
tatcagaagtgcctggccaccggcatgaagagggaggcggtacaggaggaacgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccgaatgaccctgtgactaacatctgtcag
gcagctgacaaacaactattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgaccaggtcattttgctacgggcaggctggaatgagctcctcatt
gcttccttctcccaccgatccattgatgtccgagatggtatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgttcaatccagacgccaagggcctctccaaccctagtgaggtggag
gttctgcgggagaaagtgtacgcgtcactggagacctactgcaagcagaagtaccctgag
cagcagggacggtttgccaagttgctgctacgtcttcctgccctcaggtccatcggcctt
aagtgtctagagcatctgtttttcttcaagctcattggagacacccccattgacaccttc
ctcatggagatgcttgaggctccccaccagctggcctga
Ailuropoda melanoleuca (giant panda): 100479839
Help
Entry
100479839 CDS
T01329
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha
KO
K08524
retinoid X receptor alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03320
PPAR signaling pathway
aml04148
Efferocytosis
aml04151
PI3K-Akt signaling pathway
aml04659
Th17 cell differentiation
aml04919
Thyroid hormone signaling pathway
aml04920
Adipocytokine signaling pathway
aml04928
Parathyroid hormone synthesis, secretion and action
aml04932
Non-alcoholic fatty liver disease
aml04976
Bile secretion
aml05160
Hepatitis C
aml05200
Pathways in cancer
aml05202
Transcriptional misregulation in cancer
aml05207
Chemical carcinogenesis - receptor activation
aml05216
Thyroid cancer
aml05222
Small cell lung cancer
aml05223
Non-small cell lung cancer
aml05226
Gastric cancer
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100479839 (RXRA)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100479839 (RXRA)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100479839 (RXRA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100479839 (RXRA)
03320 PPAR signaling pathway
100479839 (RXRA)
04919 Thyroid hormone signaling pathway
100479839 (RXRA)
04928 Parathyroid hormone synthesis, secretion and action
100479839 (RXRA)
09154 Digestive system
04976 Bile secretion
100479839 (RXRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100479839 (RXRA)
05202 Transcriptional misregulation in cancer
100479839 (RXRA)
05207 Chemical carcinogenesis - receptor activation
100479839 (RXRA)
09162 Cancer: specific types
05226 Gastric cancer
100479839 (RXRA)
05216 Thyroid cancer
100479839 (RXRA)
05222 Small cell lung cancer
100479839 (RXRA)
05223 Non-small cell lung cancer
100479839 (RXRA)
09172 Infectious disease: viral
05160 Hepatitis C
100479839 (RXRA)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100479839 (RXRA)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
100479839 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100479839 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100479839 (RXRA)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100479839 (RXRA)
Nuclear receptors [BR:
aml03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100479839 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
100479839
NCBI-ProteinID:
XP_034520652
Ensembl:
ENSAMEG00000011124
LinkDB
All DBs
Position
7:complement(58006707..58059772)
Genome browser
AA seq
439 aa
AA seq
DB search
MAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTP
TLGFGTGSPQLSSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHICAICGDRSS
GKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKRE
AVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYVDANMGLNPNSPND
PVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDG
ILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGL
SNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQMT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccctccctgcacccctctctggggcccggcatcggctcctcgctcggctcc
ccgggacagctgcattcgcccatcagcaccctgagctcccccatcaacggcatgggccca
cccttctcggtcatcagctcccccatgggcccccactccatgtcagtgcccaccacgcct
accctgggcttcggcaccggcagccctcagctcagctcacccatgaaccccgtcagcagc
agcgaggacatcaagcccccgctgggcctcaatggtgtcctcaaagtcccggcccacccc
tcagggaacatggcgtccttcaccaagcacatctgtgccatctgtggggaccgctcctca
ggcaagcactatggggtgtacagctgcgagggctgcaagggcttcttcaagcggacggtg
cgcaaggacctgacctacacgtgccgggacaacaaggactgcctgattgacaagcgccag
cgcaaccgctgccagtactgccgctaccagaagtgcctggccatgggcatgaagcgggaa
gctgtgcaggaggaacggcagcggggcaaggacaggaacgagaacgaggtggagtccacg
agcagtgccaacgaggacatgccggtggagaagattctggaggcagagctggctgtcgag
cccaagaccgagacgtacgtggacgcaaacatggggctgaacccaaactcgcccaacgac
cccgtcaccaacatctgccaggcagcggacaagcagctcttcacgctggtcgagtgggcc
aagcggattccgcacttctcggagctgcccctggacgaccaggtcatcctactgagggca
ggctggaatgagctgctcatcgcctccttctcccaccggtccatcgccgtgaaggacggg
atcctcctggccaccgggctgcacgtccaccggaacagcgcccacagcgcgggggtgggc
gccatctttgacagggtgttgacggagctcgtgtccaagatgcgggacatgcagatggac
aagacggagctgggctgcctgcgtgccatcgtactcttcaaccccgactccaaggggctc
tcgaacccggccgaggtcgaggcgctgagggagaaggtctacgcgtccctggaggcgtac
tgcaaacacaagtaccccgagcagccgggaaggttcgccaagctgcttctccgcctgccg
gccctgcgctccatcggcctcaagtgcctggaacacctctttttcttcaaactcatcggg
gacacgcccatcgacaccttcctcatggagatgctggaagccccccaccaaatgacttag
DBGET
integrated database retrieval system