Ailuropoda melanoleuca (giant panda): 100479088
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Entry
100479088 CDS
T01329
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aml03016
]
100479088 (TSEN54)
Transfer RNA biogenesis [BR:
aml03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
100479088 (TSEN54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
100479088
NCBI-ProteinID:
XP_034496232
Ensembl:
ENSAMEG00000009414
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All DBs
Position
13:39959361..39966708
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AA seq
530 aa
AA seq
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MEPELEPAAVEVPAGRVLCARELLAARSRSQKLPQRSHGPKDFLPDGSAAQAERLRLCRE
ELWQLLAEERVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEEALYL
LECGSIQLFHQDLPLSIQEAYQLLLTEDTMTFLQYQAFSHLKRLGYVVRRFQPSSILSPY
ERQLNLDGSAQCLEDQNGKRKRRNSSSRSINKKARALENPLQGVNETPESPTTSSPPPCN
QNSRGIEEKPQESSPVKGPMGPSRLLGSLEPWPDLANEGVGCSQESGKVENGVKGVCKPR
WNFEQISFPNMAPDSRHTLLLAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRRERER
QAEAQHFREDVNWDPEVRRCSSWQEYKQLLQRRRLQEQSRPSHLWDQPVRPLLSPGQADS
PATALKHISVMQTTHLADGGARLLEKSGGLEISFDIYQADAVATFRKNNPGKPYARMCIS
GFDEPVPDLRTLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPRDLEH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgagctcgagcccgccgcggtggaggttcccgccgggcgcgtgctctgtgcc
cgggagctcctggccgcccgctcgcggtcccagaagctgcctcagcgctcgcatgggccc
aaggacttcctccccgacggctcggcggcccaggccgagcggctgcgcttgtgccgcgag
gagctctggcagctgctggcggaggagcgcgtggagcgcctgggcagtttggtggctgcc
gagtggaggccggaagagggctttgtggaattgaagtctcctgcgggtaaattctggcag
accatgggcttctcagagcagggccggcagcggcttcaccccgaagaggccttatatctg
ctggagtgtggctccatccagcttttccaccaagatctgccactgtctattcaagaggcc
taccagctactgctgactgaggacactatgacttttctgcagtaccaggctttcagccac
ctgaagagactgggctacgtggttcgacgattccagccaagctccatcctgtccccttat
gagagacagctgaacttggatggcagtgcccagtgcttagaggatcagaatggcaagagg
aagaggaggaactccagctctcggtccattaataagaaggccagagccctggagaatccc
ctgcagggggtgaatgagacacctgagagcccgacaacctccagcccacctccttgcaac
cagaacagccgaggcatagaggagaaacctcaggagtcaagccctgtaaagggcccaatg
ggcccatctcggctgctgggatccctggagccctggcctgacctggctaatgagggggtg
gggtgcagccaggagagtggcaaagtagagaatggggtcaagggggtttgtaagccacgc
tggaactttgaacagatctccttccccaacatggctccagatagccgccacacccttctg
cttgccccagccccagagctgctcccggccaacgtcgctgggcgggagacagatgctgaa
tcctggtgtcagaagctgaaccaaaggaaggagaagctgtccaggcgggaacgggagcgg
caggcagaggcccagcacttccgggaggatgtaaactgggaccctgaggtgcggcgctgc
tccagctggcaggagtacaagcagctgttgcagagaaggcgcctgcaggagcagagccgc
ccctcacacctgtgggaccagcccgtcagacccctgctgagtcctggccaggcagactcc
ccagccacagccctaaagcacatctctgtgatgcagaccacacaccttgctgatggaggt
gcccggctgctggagaagtctgggggcttggagatcagctttgacatttaccaggctgat
gccgtggccacattccgcaagaataaccctggaaagccctacgcccggatgtgcattagt
ggatttgatgagccagttccagacctccgtaccctcaagcggttatcctaccagagtggg
gatgttcctctgatctttgccctggtggatcatggagacatctccttctacagcttcagg
gacttcacgctgcccagggatctggaacactaa
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