Ailuropoda melanoleuca (giant panda): 100480350
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Entry
100480350 CDS
T01329
Symbol
CHD3
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100480350 (CHD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100480350 (CHD3)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100480350 (CHD3)
Chromatin remodeling factors
NuRD complex
100480350 (CHD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
Helicase_C
CHDNT
CHDCT2
PHD
DUF1087
Chromo
HDA2-3
ResIII
DEAD
HMG_box
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
100480350
NCBI-ProteinID:
XP_034503164
Ensembl:
ENSAMEG00000003025
LinkDB
All DBs
Position
17:2604937..2626296
Genome browser
AA seq
1683 aa
AA seq
DB search
MLGGTTSGKPRPPTETSGQKARDPTLLEADKDDIRLLPSALGVKKRKRGPKKQKENKPGK
PRKRKKLDSEEEFGSERDEYREKSESGGSEYGTGPGRKRRRKHREKKEKKTKRRKKGEGD
GGQKVEQKSSATLLLTWGLEDVEHVFSEEDYHTLTNYKAFSQFMRPLIAKKNPKIPMSKM
MTILGAKWREFSANNPFKGSAAAVAAAAAAAAAAVAEQVSAAVSSAAPIAPSGPPTLPPP
PSADTQPPPIRRAKTKEGKGPGHKRRSKSPRVPDGRKKLRGKKMAPLKIKLGLLGGKRKK
GGSYVLQSDEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKRKVAGEDEA
DGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWE
AKEEEEEYEEEGEDEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIP
NGEWLCPRCTCPVLKGRVQKILHWRWGEPPVSVPAPQQADGNPDAPPPRPLQGRSEREFF
VKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKVKD
PHYAEMEEKYYRFGIKPEWMTVHRIINHSVDKKGNYHYLVKWRDLPYDQSTWEEDEMNIP
EYEDHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITA
TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS
APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA
QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT
GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKAD
VFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNH
PYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKILRKLKEQGHRVLIFSQMTKMLDL
LEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTV
IIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRP
GLGSKAGSMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDAT
EDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNE
KDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTTQWLVRDLRGKTEKE
FKAYVSLFMRHLCEPGADGSETFADGVPREGLSRQQVLTRIGVMSLVKKKVPVCPSPSVY
LSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKA
DVTRLPATLSRIPPIAARLQMSERSILSRLASKGTEPHPTPAFPPGPYATPPGYGAAFSA
APVGALAAAGANYSQMPAGSFITAATNGPPVLVKKEKEMVGALVSDGLDRKEPRAGEVIC
IDD
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaccacatcagggaagccccggcccccgacagagacatctgggcagaaa
gccagggacccaaccctgctggaagcagataaggatgacatccggctgctgccttcagca
ttgggtgtgaagaagagaaaacgaggacccaagaagcagaaggagaacaagccaggaaaa
ccccgaaaacgcaagaagcttgacagtgaggaggaatttggctccgagcgagatgagtac
cgggagaagtcagagagcggaggcagcgaatatggaaccggaccaggtcggaaacggagg
cggaagcacagagaaaaaaaggagaagaagacaaagcggcggaaaaagggggagggagac
ggggggcaaaaggtagaacagaagtcgtctgcaactctgcttctgacctggggcctggag
gacgtggagcatgtgttctccgaggaggattaccacacactcaccaactacaaagccttt
agccagttcatgaggcccctgattgcgaagaagaatcctaagatcccgatgtctaagatg
atgaccatcctcggggccaagtggagagagttcagtgccaacaaccccttcaaggggtcg
gcagccgctgtggcggcggcggcggccgcagcggctgcggctgtggccgagcaggtgtca
gctgctgtgtcatcggccgcccccatagcaccttccggaccccccaccctcccaccacct
ccttctgccgatacccagcccccacccatccgaagagccaaaaccaaagagggcaaaggt
ccaggccataaacggcggagtaagagcccccgagtgcccgatggacgcaagaagcttcgg
gggaagaagatggcaccgctcaaaatcaaactagggctgctgggtggcaagaggaagaag
ggaggctcgtatgttttgcagagcgatgagggccctgagccagaggccgaggagtcagac
ctggacagcggcagcgtccacagcgcctcgggccggcctgatgggcctgtccgcaccaag
aagctcaagagaggccggccagggaggaagaagaggaaggtggccggggaggacgaggct
gacggctatgagacagatcatcaggattactgcgaggtgtgccagcaggggggggaaatt
attctgtgcgacacctgccctcgtgcctaccacctcgtctgccttgatcctgagctggac
cgggctcccgagggcaaatggagctgcccccactgcgagaaggagggggtgcagtgggag
gccaaggaggaggaggaggagtacgaagaggagggagaggacgaaggggagaaggaggag
gaagacgaccacatggagtactgccgcgtgtgcaaggatgggggcgagctcctgtgctgc
gacgcgtgcatctcgtcctaccacattcactgtctgaacccgcccctgcccgacatcccc
aatggggaatggctgtgtccccgctgcacgtgccccgtgctcaaaggccgcgtgcagaag
atcctgcactggcggtggggggagccacccgtgtccgtgccagccccccagcaggctgac
gggaaccccgatgccccgccgccccgtcctcttcaaggccgatcggagcgagagttcttt
gtcaagtgggtaggactgtcgtactggcactgctcctgggccaaggagcttcagttggag
atcttccacttggtgatgtaccggaactaccagcggaagaacgacatggacgagccccca
cccctggactatggctcgggcgaggacgacgggaagagcgacaagcgcaaggtgaaggac
ccgcactacgcggagatggaggagaagtactatcgctttggcatcaagcccgagtggatg
accgtgcaccgcatcatcaaccacagtgtggataaaaaggggaattaccactatctagtg
aaatggagggacttgccctatgaccagtccacgtgggaggaggacgaaatgaacatcccc
gagtacgaagaccacaagcagagctactggagacaccgagaactgattatgggggaggac
cctgcccagccccgcaagtataagaagaagaagaaggagctgcagggagacgggcccccc
agttctcctactaacgatcctacagtgaaatacgagacccagccacggtttatcacggcc
accgggggcacactgcacatgtaccagctagagggcttgaactggctgcgcttctcgtgg
gcccagggcaccgacaccatcctggctgacgagatggggctgggcaagaccatccagacc
atcgtgtttctctactcgctctataaggagggccacacaaagggtcccttcctggtgagt
gcccccctctctaccatcattaactgggagcgggagttccagatgtgggcacccaagttc
tacgtggtgacgtacacgggtgacaaggacagccgggccatcatccgtgagaacgagttt
tccttcgaagacaacgccatcaaaggtggcaagaaagcttttaagatgaagagggaggcc
caggtgaagttccacgttctcctaacatcgtatgagctgatcaccatcgatcaggcggca
ctcggctccatccgctgggcctgcctcgtggtggatgaagcccatcggctcaagaataac
cagtccaagtttttcagggtcctcaatggctacaagatagatcataagttgctgctgacc
ggaactccgttgcagaataacctggaggagctcttccacctgctaaacttcctcacccca
gagaggtttaacaatctggagggcttcctggaggagtttgctgacatatccaaagaagac
cagattaagaaactgcatgatttgctagggccgcacatgctgcggaggctgaaggccgac
gtcttcaagaacatgccggctaagacggagctcatcgtgcgggtggagctgagccccatg
cagaagaagtactacaagtacatcctgactcggaacttcgaggccttgaactcgcgaggt
ggtgggaatcaggtgtcactgctgaacatcatgatggatcttaagaagtgctgcaaccac
ccctacctcttccccgtggctgctatggagtcccccaaactccccagtggggcctacgag
ggcggggcactgattaaggcgtccggcaagctcatgcttctgcagaagattctgcgcaag
ctgaaagagcaaggacacagagtgctcatcttctcgcagatgaccaagatgttggacctg
ctagaggactttttagactacgaagggtacaagtacgagcgcattgacggcggcatcacg
ggcgccctgaggcaggaggccatcgatcggttcaacgctcccggggcccagcagttctgc
ttcctgctgtccacccgcgccgggggcctgggcatcaatctggccactgccgacacggtc
atcatcttcgattctgactggaacccccataacgacatccaggccttcagtcgcgctcat
cgcatcggccaggccaacaaggtgatgatttaccggtttgtgactcgcgcgtccgtggaa
gagcgaatcacacaagtggccaagaggaagatgatgctgacacacttggtggtccggccc
gggctgggctccaaggcgggctccatgtccaagcaggagctggatgacatcctcaaattc
ggcaccgaggagctgttcaaggatgagaacgagggggagaacaaggaggaggacagcagt
gtgattcactacgacaacgaggccatcgctcggctgttggaccggaaccaggatgcgacg
gaggacacggatgtgcagaacatgaacgagtatctcagctccttcaaggtggcccagtac
gtggtgcgggaggaagacaagatcgaggagatcgaacgcgagatcatcaagcaggaggag
aacgtggaccccgactactgggagaagctgctgaggcaccactacgagcagcagcaggag
gacctggcccgcaacctgggcaagggcaagcgcgtgcgcaagcaggtcaactacaacgac
gccgctcaggaggaccaagataaccagtccgaatactccgtgggatcagaggaggaagat
gaggactttgatgagcgtccagaagggcggcgacagtcaaagaggcagcttcggaacgag
aaggataagccactccctccactgctggctcgagttgggggcaacattgaggtgctggga
ttcaacacccggcagcggaaggccttcctcaacgccgtgatgcgctgggggatgcccccc
caggacgccttcaccacccagtggctggtgcgggacctgaggggcaagacggagaaggag
ttcaaggcctatgtgtctctgttcatgcgccatctctgtgagcctggggcggacggctcg
gaaacctttgctgacggcgtccctcgggagggcctgagtcgccagcaagtgctgacccga
attggagtcatgtctctagtcaagaagaaggtaccggtctgtccttcacccagcgtctac
ctatcacaggagccggcgcaccccgccatggccctccacgcccgcttcgccgaggccgaa
tgcctggccgagagccaccagcacctctccaaggagtcgctggcagggaacaagccggcc
aacgccgtcctgcacaaggttctgaaccagctggaggagttgctgagcgacatgaaggcg
gacgtgacccgcctgccagccacgctgtcccgaataccccccatcgcagcccgcctgcag
atgtccgagcgcagcattctcagccggctggccagcaagggcacggagcctcaccccaca
ccggccttccccccggggccctacgctacgcctccggggtacggggcggccttcagcgcc
gcccccgtcggggccctggccgccgcaggcgccaactacagccagatgcctgcaggctcc
ttcatcacagccgccaccaacggccctccagtgctggtgaagaaggagaaggaaatggtg
ggggcactggtgtcagacgggctggatcggaaggagccccgagccggggaggtgatctgt
atagacgactga
DBGET
integrated database retrieval system
