KEGG   Ailuropoda melanoleuca (giant panda): 100482085
Entry
100482085         CDS       T01329                                 
Symbol
NGEF
Name
(RefSeq) ephexin-1
  KO
K07525  neuronal guanine nucleotide exchange factor
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100482085 (NGEF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100482085 (NGEF)
Membrane trafficking [BR:aml04131]
 Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    100482085 (NGEF)
SSDB
Motif
Pfam: RhoGEF SH3_1 SH3_9 PH SH3_2 SH3_16
Other DBs
NCBI-GeneID: 100482085
NCBI-ProteinID: XP_034511297
Ensembl: ENSAMEG00000016403
LinkDB
Position
2:complement(192406911..192506817)
AA seq 710 aa
METRGSEGLEKPWKKSVSGSQETDGVQDKVRPELLSEDEKTRHTNRETQDREPRGHIPIQ
RNSIFNRTVRRKSKGKARDTPEENTPHPADSVENRQPANEPLTLSSPQSRMSRWRIPIRP
DPGAKRTSESSSTPGNGATPEECPALADSPTTLTEALQMIHPIPADSWRNLIEQIGLLYQ
EYRDKSTLQEIETRRQQDAEIHTNARGSPASEVAPEEEEDEEEEDEPASPPERKALPQIC
LLSNPHSRFNLWQDLPEIQSSGVLEILQPEEIKLQEAMFELVTSEASYYKSLNLLVSHFM
ENERLKKILHPSEAHILFSNVLDVMAVSERFLLELERRMEENIVISDVCDIVYHYAANHF
SVYITYVSNQTYQERTYKQLLQEKAAFRELIAQLELDPKCRGLPLSSFLILPFQRITRLK
LLVQNILKRVEERSERECTALDAHKELEMVVKACNEGVRKMSRTEQMISIQKKMEFKIKS
VPIISHSRWLLKQGELQQMSGPKTSRTLRTKKLFREIYLFLFNDLLVICRQIPGDKYQVF
DSAPRGLLRVEELEDQGQSLANVFILRLLENADDREATYMLKASSQSEMKRWMTSLAPNR
RTKFVSFTSRLLDCPQVQCVHPYVAQQPDELTLELADILNILEKTEDGWIFGERLHDQER
GWFPSSMTEEILNPKIRSQNLKECFRVHKMDDPQRSQNKDRRKLGSRNRQ
NT seq 2133 nt   +upstreamnt  +downstreamnt
atggagaccaggggatctgaaggtttggaaaagccctggaagaaatcggtgagcggttca
caggagactgatggtgtgcaggacaaggtgagacctgagttactctcagaagatgagaaa
acgcgccacaccaaccgagagacgcaagacagagaaccccgcggccacatcccgattcag
agaaactccatcttcaaccgcaccgtgagacgcaaaagcaaaggcaaagccagagacact
cctgaagagaacaccccccacccggcagattcagtggaaaatagacagcctgcaaatgag
cccctgaccttgagctccccccagagcagaatgtctcggtggagaatcccaatacggcca
gacccaggagccaagagaacaagcgagtcgtcctccaccccgggaaatggggccacaccc
gaggagtgcccggcgctcgccgacagccccaccacgctcaccgaggccctgcagatgatc
caccccattcccgccgactcctggagaaacctcatcgaacaaatagggctcctgtatcag
gaataccgagataaatcaacactccaagagattgaaaccaggaggcagcaggatgcggaa
atacacaccaatgcccgtggttccccggccagcgaggtggctccagaagaggaggaggac
gaggaggaggaggacgagccagcaagcccacccgagaggaaggctctgccccagatctgc
ctgctcagtaacccgcactcaagatttaacctctggcaggatctccccgagatccagagt
agcggggtgctggaaatcctccagcccgaggagatcaaactgcaggaggccatgttcgag
ctggtcacttccgaggcctcctactacaaaagcctgaacctgcttgtgtctcacttcatg
gagaatgagcgcctgaagaagatcctgcacccgtccgaggcgcacatcctcttctccaac
gtgctggacgtcatggccgtcagtgagcggttcctgctggagctggagcgccggatggag
gagaacatcgtcatctcggacgtgtgtgacatcgtgtaccattacgcggccaaccacttc
tccgtgtacatcacctacgtcagcaaccagacgtaccaggagaggacctacaagcagctg
ctccaggagaaggccgcctttcgggagctgattgcgcagctggagctggaccccaagtgc
cgggggctgcccctgtcctccttcctcatcctgcctttccagaggatcacacgcctcaag
ctgttggtgcagaacattctgaagagagtggaagaaaggtctgagcgtgagtgcacggcc
ttggatgcccacaaagagctggaaatggtggtaaaagcgtgcaacgagggtgtcaggaaa
atgagccgcacggagcagatgatcagcattcagaagaagatggagtttaagatcaagtcg
gtgcccatcatctcccactcccgctggctgctgaagcagggtgagctccagcagatgtcg
ggccccaagacatcccgaaccctgcggaccaagaaactcttccgggaaatttacctcttc
ctcttcaacgacctgctggtgatctgccgccagatccccggagacaagtaccaagtgttt
gactcggccccacggggcctcctccgcgtggaggagctggaggaccagggccagtcactg
gccaacgtgttcatcctgcggctgctggagaacgcggacgaccgggaggccacctacatg
ctgaaagcgtcctctcagagtgagatgaagcgttggatgacctcactggcccccaaccgg
agaaccaagtttgtttccttcacttcccggctgctggactgcccccaggtccagtgcgtg
cacccgtacgtggcccagcagccggacgagctgacactggagctggctgacatcctaaac
atcctggaaaagactgaagacgggtggatctttggcgagcgtctgcacgaccaggagaga
ggctggttccccagctccatgactgaggagatcttgaatcccaagatccggtcccagaac
ctcaaggaatgtttccgagtccacaaaatggatgaccctcagcgcagccagaataaggat
cgcaggaagctgggcagccggaatcggcaatga

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