Amycolatopsis mediterranei S699: RAM_13390
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Entry
RAM_13390 CDS
T01822
Name
(GenBank) UreA amidolyase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
amn
Amycolatopsis mediterranei S699
Pathway
amn00220
Arginine biosynthesis
amn00791
Atrazine degradation
amn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amn00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
RAM_13390
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
RAM_13390
Enzymes [BR:
amn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
RAM_13390
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GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Biotin_carb_N
Dala_Dala_lig_C
HlyD_3
LAL_C2
Biotin_lipoyl_2
GCV_H
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
AEK41168
UniProt:
A0A9R0NV34
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Position
complement(2820261..2823611)
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AA seq
1116 aa
AA seq
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MALDTSCDAIHPGYGFLSEDAAFARACEDAGIAFAGPAPEHLEVFGSKHTAREAAIAAGV
PLLAGTGLLSDVDDALARAEDIGYPVMLKATGGGGGIGMRACASPDELRAAWDTVRSVAA
KSFASSGVFLERLVTRARHVEVQVFGDGFGEVLALGTRDCSLQRRNQKVVEECPAPDLPE
DVRKHLVESAVALCSSVRYRSAGTVEYVYDPERGEAAFLEVNTRLQVEHPVTEAVYGVDL
VAWMLRLAQGDRAMFRAVPVARGHAVEARVYAEDPGAGHRPSAGLVTRVTLPADTRVDTW
VEPGTTVTTHYDPLLAKVICTGADRAEALANLREALAATRFDGVQTNLGQLRAAATDPAF
GAAAHDTSTLDSVGDAEPRIDVVRGGTMTTVQDWPGRTGFWHVGVPPSGPMDDLSLRLGN
LALGNPEGAPGLECTVDGVALRFSRATEVCVTGAPTTVLVDGTEVSLWTPVEVPAGATLD
VRSCTAGLRSYLLVRGGVDVPEFLGSAATFTLGKFGGHGGRALAAGDVLRPGPAPADPVV
GPVPTADRPEFASHWTIGALEGPHAAPEFFTPDDVDTFYATDWQVHFNSARTGVRLVGPR
PKWARPDGGEAGLHPSNIHDTPYAIGAVDYTGDLPILLGPDGPSLGGFVCPATVATGERW
KLGQLRPGDTVRFVPIGTDHAAALRTRPASAVEPSRPARDDGGVLARLSSSDCTESSGEP
SVTYRRSGDDNLLVEYGEMKLDLALRMRVHALAERLAAEGVPGIVDLTPGIRSLQVHVDP
DALPVGKALGLVRELERDLPPTHDLVVPSRSVRLPLSWDDPATREAIERYMTGVRDDAPW
CPWNIEFIRRVNGLSSVDEVYRTVFDAEYLVLGLGDVYLGAPVATPLDPRHRLVTTKYNP
ARTWTAENSVGIGGAYLCIYGMEGPGGYQFVGRTVQVWNSWRGGDRPWNLRFFDRISWYP
VSAEELLDLRAQSASGTLDLDTTEGSFALADYQKFLAENAESIAGFRATQAAAFEAERQA
WAAAGEFDPKPEPVTRPPARVEAPPGGHVVEAPFAATVWRVDVTAGERVEDAQSLVTLEA
MKTEARIPAPASGEVVEVLVSPGDQVAPGTPLVVLA
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctggacaccagctgcgacgcgatccaccccgggtacggcttcctctcggaggac
gccgcgttcgcacgcgcctgcgaagacgccgggatcgcgttcgccgggccggccccggag
cacctggaggtgttcggcagcaagcacaccgcgcgcgaggcggcgatcgcggcgggcgtg
ccgctgctggccggcaccggcctgctgtccgatgtggacgatgcgctggcccgcgccgag
gacatcggctacccggtgatgctcaaggcgaccggcggcgggggcgggatcgggatgcgc
gcctgcgcatcgccggacgagctgcgcgccgcctgggacaccgtgcgcagcgtcgcggcc
aagagcttcgccagctccggcgtgttcctcgaacgcctggtgacccgcgcgcggcacgtc
gaggtccaggtgttcggcgacggcttcggcgaggtgctggccctgggcacgcgcgactgc
tcgctgcagcggcgcaaccagaaggtcgtcgaggagtgcccggcaccggacctgcccgag
gacgtccggaagcacctggtggagtccgcggtcgcgctgtgctcgtcggtgcggtaccgc
tccgcgggcaccgtcgaatacgtttacgaccccgaacgcggcgaggcggcgttcctcgag
gtcaacacgcggctgcaggtcgagcacccggtcaccgaggcggtctacggcgtcgacctg
gtcgcctggatgctgcggctcgcccagggcgaccgcgcgatgttccgggcggtcccggtc
gcccgcgggcacgccgtcgaagcgcgcgtgtacgccgaggacccgggcgccgggcaccgg
ccgagcgcgggtctcgtcacccgggtcacgctgcccgcggacacccgcgtcgacacctgg
gtcgagccgggcaccaccgtcaccacgcactacgacccgttgctggccaaggtgatctgc
accggcgccgaccgcgccgaggcgctggcgaacctgcgggaagcgctcgccgcgacccgg
ttcgacggggtgcagaccaacctgggccagctgcgggcggcggccaccgacccggccttc
ggcgccgcggcgcacgacacgtccactttggacagcgtcggagacgcggagccgcggatc
gacgtggtccgcggcgggaccatgacgaccgtgcaggactggccgggccgcaccgggttc
tggcacgtcggggtgccgccgagcggcccgatggacgacctctcgctgcggctgggcaac
ctggcgctgggcaaccccgaaggcgcgcccggcctggagtgcactgtggacggggtggcg
ctgcggttttcccgtgccaccgaagtctgcgtcaccggggcgccgacgacggtcctcgtc
gacggcaccgaggtttccctgtggacaccggtcgaagtccccgcgggagcgacgctcgac
gtccggtcctgcacggccgggctgcgcagctacctcctggtgcgcggcggcgtcgacgtg
ccggagttcctcggcagcgcggcgacgttcacgctggggaagttcggcggccacggcggc
cgcgcgctggccgccggggacgtcctgcgccccggtccggcccccgcggacccggtcgtg
ggcccggtgccgaccgccgaccggccggagttcgcttcccactggacgatcggcgcgctc
gaaggaccgcacgcggccccggagttcttcaccccggacgacgtcgacacgttctacgcc
acggactggcaggtgcacttcaactcggcgcgcaccggcgtccggctcgtcgggccgcgg
ccgaagtgggcacggccggacggcggcgaggcgggcctgcacccgtcgaacatccacgac
acgccgtacgcgatcggtgccgtcgactacaccggcgacctgccgatcctgctcggcccg
gacgggcccagcctgggcgggttcgtctgcccggcgacggtcgccaccggcgagcggtgg
aagctcgggcagctgcggccgggcgacaccgtgcggttcgtgccgatcggcaccgaccac
gcggcggcgctgcggacgcggccggcgtcggcggtcgagccgagccgccccgcgcgcgac
gacggcggtgtcctcgcgcgactgtcctcttcggactgtacggaatcttcgggcgagccg
tcggtcacctaccgccgcagcggcgacgacaacctgctcgtcgagtacggcgagatgaag
ctcgacctggcgctgcggatgcgggtgcacgcgctggccgagcgcctggcggccgaaggc
gtaccggggatcgtggacctcacgccgggcatccggtcgctgcaggtgcacgtcgacccg
gacgcgctgccggtcggcaaggcgctcgggctggtgcgcgaactggagcgggacctcccg
ccgacgcacgacctggtggtgccgagccgcagcgtccggttgccgctgtcgtgggacgac
cccgccacgcgcgaggcgatcgagcggtacatgaccggcgtgcgcgacgacgcgccgtgg
tgcccgtggaacatcgagttcatccggcgcgtcaacgggctgtccagtgtggacgaggtg
taccggacggtgttcgacgcggagtacctcgtgctcggcctcggcgacgtctacctcggc
gcgccggtggcgacgccgctggacccgcgccaccgcctggtcacgacgaagtacaacccg
gcgcggacgtggacggcggagaactccgtcggcatcggcggcgcctacctgtgcatctac
ggcatggagggcccgggcggctaccagttcgtcgggcggaccgtccaggtgtggaacagc
tggcgcggcggggaccggccgtggaacctgcggttcttcgaccggatctcctggtacccg
gtgtcggccgaagagctgctggacctgcgggcgcagagcgcgtccggcacgctggacctc
gacaccaccgagggctccttcgccctggcggactaccagaagttcctcgcggagaacgcc
gagagcatcgcgggcttccgggccacgcaggcggcggcgttcgaagcggaacggcaggcg
tgggccgcggcgggcgagttcgacccgaaaccggagccggtcacccggccgccggcgcgg
gtcgaggcgccgccgggcgggcacgtcgtggaggcgccgttcgcggcgacggtgtggcgg
gtcgacgtcaccgcgggcgagcgcgtcgaggacgcgcagtccctggtgacgctggaagcg
atgaagacggaggcgcggatcccggcgccggcgagcggtgaggtggtcgaagtgctcgtg
tcccccggcgatcaggtggcgcccggaacaccgctggtggtgctggcatga
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